barSeed - Barley Seed Development Database

Probe ABC00815

Source Contig ABC00815

barSeed

Links

Affymetrix Source Sequence (2900 bp)

>ABC00815 2900
GAATTCGATGAGTCATGTCATGATCTATAAGTGTCAGTTCATCTTATCATCTCGGAGAAC
AATACAAAGCTAGTTTTATAAAAAACAGTCTAGTCTAGAAGAACAGTCCACATGTAAGGC
TTTAAAAATCGAGCATATCTTAACAACCCACACACGATTGCAACTTAGTCCTACAAAAGT
TTTGCCTTTCTTGTTTCTCGCTAGCAACCTATACAAGGTTCCAAAATCGTTTGCAGAAGT
GATACTAGCTTGATAAGTGCGTGACATGTAAAGTGAATAAGGTGAGTCATGTATACCAAA
CCTCGGGATTTCTATACTTTGTGTATGATCATATGCACAACTAAAAAGCAACTTTGATGA
TCAATCCAAAAGTACGTTTGTAGCTTGTGCAACCTAACACAATGTACCAAAAATCCATTT
CCAAACATCCAAACACAATTGTTAAATTTGATGCAAAGAAGGAAAGAGATGAAGCCATGG
CTACTATAAATAGGCATGTAGTATAGAGATCATCACAAGCACAAGGAGCAAAACCAAGCA
ACACTCGTTAACACCAATCCACCATGAAGACCTTCCTCATCTTTGCACTCCTCGCCATTG
CGGCAACAAGTACGATTGCGCAGCAACAACCATTTCCACAACAACCCATCCCACAACAAC
CACAACCATACCCACAACAACCACAACCATATCCACAACAACCCTTCCCACCGCAACAAC
CATTTCCACAACAACCCGTCCCACAACAACCACAACCATACCCACAACAACCCTTCCCAC
CGCAACAACCATTTCCACAACAACCACCATTTTGGCAACAAAAACCATTTCCACAACAAC
CACCATTTGGGCTACAACAACCAATTCTATCGCAGCAACAACCATGTACACCACAACAAA
CACCACTCCCACAAGGACAACTGTACCAAACGCTTCTGCAACTACAAATACAATATGTTC
ATCCATCTATTTTGCAACAGCTAAACCCATGCAAGGTATTCCTCCAGCAGCAGTGCAGCC
CTGTGCCAGTGCCACAACGTATTGCTAGGTCGCAAATGTTGCAGCAGAGCAGTTGCCATG
TGTTGCAGCAACAATGTTGCCAGCAACTACCCCAAATCCCCGAACAATTCCGTCATGAGG
CAATCCGTGCAATCGTCTATTCTATCTTCCTGCAAGAACAACCCCAACAGTTGGTCCAAG
GTGTCTCCCAACCACAACAACAGTTGCAGCAGCAGCAAGTCGGACAATGTTCTTTCCAAC
AACCTCAACCACAACAAGTTGGTCAACAACAACAGGTACCGCAGAGTGCTTTCTTGCAGC
CACACCAGATAGCTCAGCTTGAGGCGACGACTTCCATTGCGCTGCGTACCCTACCAATGA
TGTGCAGTGTTAATGTGCCGTTGTACAGGATCCTGCGAGGCGTTGGCCCCAGTGTTGGTG
TCTAATGATAAGAAATCACCGTTGTCTAATCGATGTATATGTCGATGTAGCGGTGACAAA
TAAAGTGTCACACAACCTTATGTGTGACCGGCCCAAACTAGTTTTTAAATTCTAAAATAA
AATATAAATAAAGTTCATGATGACTACCTGGAAAGTTTCTCAACAAGTTGAAGTTGTATT
AATTCCCAAACTGAACGACTACGTGAAAAGACAGTCACACCATGTTTGTACATCCACCCC
TTTGCTCGAAATGGCGTTCTTTTGCTGGACAGCCGAGCTTCAGAATCTGCCGTCAAGTTC
CTGAGATCCATCCACAGATGTCGTTCACATTGTTCGCCATGGCCTCTGACAATAAACAGC
CTCTTGAGGAGCCTCTTGCACCTGCAAGGAATCATCGTCGTTTTGCAACAAATATATATA
GTGTCCTCACACTCTCAAAACAACAATGTACCATTACTAAAACAGCTCATGAATGATATC
ACCATTCAAATCAAATCTATAACAGCACAGCAAAACACTACCAGAAAACTCATAGCAGGT
TCCTTCGGACGGGCCTCCAAACGGCGCCAAAACCAGATACATAGATAGCTCACAAATAAC
AGCACGTTTCCCAGCTTCTTCTACTAAACCTAGCTAGGAAATGTTCAACGAGATGAACTC
ATGGACATTTTGTTTTTGACAAGTATCTAAACAAGAAAAACTGTCAAAGTTGAACAAAGC
ATGTAGATATAGATTACAAGCATGCCCATCTCCCCATCTTCAAAATTCAGCACATCATTA
ATGATATGAGAGGCCGAATAAGTAAGGTTCAGCCTAGCTAATTAGCTTCAAGATAACCAT
TCTTGCAGGAACTCCAGCGAGCAAGCTAGCTAATTAGCTTTAAGCTAACGACCAACTCGC
AGCTGCGTACGGACGTAGGCAGGACACATGACGCGAGATTGTTTGATTGTCGATTTCTAT
TGCTTTGTTCGATTTTAATCAGGCCCGGTCTCCACTCTGCCAACCGCCGTGTACTTTCCG
ACGAGACACACGTACGAGAGCGAGTACTTCCGAGCTGTGGAGATGAAGCAACCAAGCAGC
CTATGCTAGGTGGATGGATTCTCACGGTACATAGCACATGCACGTACGTCAACCAGCCGC
CGTCGCGATTGATCGATCTTGGCAACTCGACGGAACACACGCAGGCGAGAATACGATGAT
ATATATGATGGCTATGGCAGCATGTCCCTCTCGATTCCTTTTTTATTATTGATCTCTCGG
TTTCGATTGCAATTGTTACAAGGTGATCAATACATGTTAATTATCATCACACAAAGTCCA
TCAACCTACTTAAGGATCCTTGTGCTATTTTCCCGTAAAACCAACACTCGCCTAAACAAC
ACACGTACAGTATTGCTCAAGACATCGACACAGACTAAGTGTGTTCCCCTCTTTGAGTAA
TATAAACAAGCCAAGAATTC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_75622.1	1651	0.0	2 - 1651	99	1648 / 1650	CUST_6741_PI390587928 CUST_25329_PI390587928 CUST_37700_PI390587928 CUST_13624_PI390587928 CUST_17015_PI390587928 CUST_31646_PI390587928 CUST_13651_PI390587928 CUST_13632_PI390587928 CUST_1122_PI390587928 CUST_7621_PI390587928 CUST_13671_PI390587928 CUST_32375_PI390587928 CUST_34593_PI390587928 CUST_37704_PI390587928 CUST_22790_PI390587928 CUST_3883_PI390587928 CUST_13664_PI390587928 CUST_34191_PI390587928 CUST_3902_PI390587928 CUST_7659_PI390587928 CUST_7629_PI390587928 CUST_3896_PI390587928 CUST_26369_PI390587928 CUST_1125_PI390587928 CUST_7658_PI390587928 CUST_4629_PI390587928 CUST_13625_PI390587928 CUST_32236_PI390587928 CUST_41658_PI390587928 CUST_7618_PI390587928 CUST_37701_PI390587928 CUST_13670_PI390587928 CUST_26608_PI390587928 CUST_40753_PI390587928 CUST_7631_PI390587928 CUST_17013_PI390587928 CUST_32897_PI390587928 CUST_3904_PI390587928 CUST_41697_PI390587928 CUST_11910_PI390587928 CUST_32234_PI390587928 CUST_37060_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012
MLOC_46003.1	1379	0.0	1 - 1379	94	1297 / 1379	CUST_6741_PI390587928 CUST_13624_PI390587928 CUST_41660_PI390587928 CUST_31646_PI390587928 CUST_13651_PI390587928 CUST_13632_PI390587928 CUST_22614_PI390587928 CUST_7621_PI390587928 CUST_13671_PI390587928 CUST_32375_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_7659_PI390587928 CUST_13666_PI390587928 CUST_7629_PI390587928 CUST_22657_PI390587928 CUST_13627_PI390587928 CUST_32236_PI390587928 CUST_13670_PI390587928 CUST_7631_PI390587928 CUST_32897_PI390587928 CUST_3904_PI390587928 CUST_16069_PI390587928 CUST_32234_PI390587928 CUST_13662_PI390587928 CUST_37060_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012
MLOC_22764.1	1083	0.0	1 - 1083	92	996 / 1084	CUST_11194_PI390587928 CUST_22851_PI390587928 CUST_37700_PI390587928 CUST_13612_PI390587928 CUST_41660_PI390587928 CUST_23494_PI390587928 CUST_22614_PI390587928 CUST_7619_PI390587928 CUST_37667_PI390587928 CUST_22657_PI390587928 CUST_13627_PI390587928 CUST_15916_PI390587928 CUST_16069_PI390587928 CUST_7641_PI390587928 CUST_37671_PI390587928 CUST_11910_PI390587928 CUST_37060_PI390587928	ABC00069 ABC00241 ABC00282 ABC00295 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC53012
MLOC_6381.1	1035	0.0	1 - 1035	89	919 / 1035	CUST_6741_PI390587928 CUST_11194_PI390587928 CUST_2503_PI390587928 CUST_37700_PI390587928 CUST_13638_PI390587928 CUST_41660_PI390587928 CUST_31646_PI390587928 CUST_22614_PI390587928 CUST_7621_PI390587928 CUST_32375_PI390587928 CUST_13615_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_37662_PI390587928 CUST_7629_PI390587928 CUST_37667_PI390587928 CUST_22657_PI390587928 CUST_13627_PI390587928 CUST_32236_PI390587928 CUST_26608_PI390587928 CUST_40753_PI390587928 CUST_15916_PI390587928 CUST_32897_PI390587928 CUST_3904_PI390587928 CUST_16069_PI390587928 CUST_7641_PI390587928 CUST_32234_PI390587928 CUST_37060_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012
MLOC_22496.1	998	0.0	188 - 998	90	729 / 812	CUST_11194_PI390587928 CUST_2503_PI390587928 CUST_22851_PI390587928 CUST_37700_PI390587928 CUST_13638_PI390587928 CUST_41660_PI390587928 CUST_13632_PI390587928 CUST_22614_PI390587928 CUST_37704_PI390587928 CUST_37697_PI390587928 CUST_37662_PI390587928 CUST_37667_PI390587928 CUST_22657_PI390587928 CUST_4629_PI390587928 CUST_13627_PI390587928 CUST_37062_PI390587928 CUST_13670_PI390587928 CUST_15916_PI390587928 CUST_4631_PI390587928 CUST_16069_PI390587928 CUST_7641_PI390587928 CUST_37671_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC52892 ABC53012
MLOC_57151.1	595	0.0	1 - 595	90	543 / 601	None	ABC00295 ABC00301 ABC00502 ABC00523 ABC00524 ABC00530 ABC00765 ABC00785 ABC00811 ABC00815 ABC00822
MLOC_47377.1	720	0.0	10 - 720	84	624 / 742	None	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC32263 ABC37919 ABC53012
MLOC_30835.1	717	2e-179	1 - 616	86	532 / 619	CUST_37669_PI390587928 CUST_37660_PI390587928 CUST_7655_PI390587928 CUST_40697_PI390587928 CUST_13668_PI390587928 CUST_37063_PI390587928 CUST_22637_PI390587928 CUST_7637_PI390587928 CUST_34597_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC52892 ABC53012
MLOC_47363.1	407	8e-169	1 - 407	93	379 / 407	CUST_6741_PI390587928 CUST_25329_PI390587928 CUST_37700_PI390587928 CUST_17015_PI390587928 CUST_31646_PI390587928 CUST_1122_PI390587928 CUST_7621_PI390587928 CUST_32375_PI390587928 CUST_22790_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_34191_PI390587928 CUST_3902_PI390587928 CUST_7629_PI390587928 CUST_3896_PI390587928 CUST_26369_PI390587928 CUST_1125_PI390587928 CUST_7658_PI390587928 CUST_32236_PI390587928 CUST_41658_PI390587928 CUST_37062_PI390587928 CUST_7618_PI390587928 CUST_13625_PI390587928 CUST_37701_PI390587928 CUST_17013_PI390587928 CUST_32897_PI390587928 CUST_4631_PI390587928 CUST_3904_PI390587928 CUST_41697_PI390587928 CUST_32234_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012
MLOC_28499.1	321	5e-131	1 - 321	93	299 / 321	CUST_6741_PI390587928 CUST_25329_PI390587928 CUST_17015_PI390587928 CUST_31646_PI390587928 CUST_1122_PI390587928 CUST_7621_PI390587928 CUST_32375_PI390587928 CUST_13646_PI390587928 CUST_22790_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_34191_PI390587928 CUST_3902_PI390587928 CUST_7629_PI390587928 CUST_3896_PI390587928 CUST_26369_PI390587928 CUST_1125_PI390587928 CUST_7658_PI390587928 CUST_32236_PI390587928 CUST_41658_PI390587928 CUST_37062_PI390587928 CUST_7618_PI390587928 CUST_13625_PI390587928 CUST_37701_PI390587928 CUST_17013_PI390587928 CUST_32897_PI390587928 CUST_4631_PI390587928 CUST_3904_PI390587928 CUST_41697_PI390587928 CUST_32234_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012
MLOC_29313.1	265	8e-109	6 - 265	94	245 / 260	None	ABC00241 ABC00282 ABC00523 ABC00524 ABC00540 ABC00815 ABC00822
MLOC_23907.1	277	8e-99	6 - 276	91	249 / 274	None	ABC00241 ABC00282 ABC00295 ABC00540 ABC00815 ABC00822
MLOC_79129.1	1007	4e-97	659 - 1006	85	309 / 362	None	ABC00815
MLOC_65457.1	295	1e-96	1 - 291	89	261 / 294	CUST_6741_PI390587928 CUST_31646_PI390587928 CUST_7621_PI390587928 CUST_32375_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_7629_PI390587928 CUST_32236_PI390587928 CUST_40719_PI390587928 CUST_32897_PI390587928 CUST_3904_PI390587928 CUST_32234_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00585 ABC00711 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012
MLOC_25576.1	359	7e-90	1 - 321	85	287 / 336	CUST_6741_PI390587928 CUST_31646_PI390587928 CUST_7621_PI390587928 CUST_32375_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_7629_PI390587928 CUST_32236_PI390587928 CUST_32897_PI390587928 CUST_3904_PI390587928 CUST_32234_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012
MLOC_27672.1	236	1e-86	8 - 236	92	211 / 229	CUST_25329_PI390587928 CUST_17015_PI390587928 CUST_1122_PI390587928 CUST_13646_PI390587928 CUST_22790_PI390587928 CUST_34191_PI390587928 CUST_3902_PI390587928 CUST_3896_PI390587928 CUST_26369_PI390587928 CUST_1125_PI390587928 CUST_7658_PI390587928 CUST_37062_PI390587928 CUST_41658_PI390587928 CUST_7618_PI390587928 CUST_13625_PI390587928 CUST_37701_PI390587928 CUST_17013_PI390587928 CUST_4631_PI390587928 CUST_41697_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012
MLOC_355.1	568	1e-82	1 - 398	82	332 / 405	CUST_25348_PI390587928 CUST_34594_PI390587928 CUST_37660_PI390587928 CUST_13669_PI390587928 CUST_7655_PI390587928 CUST_38544_PI390587928 CUST_13622_PI390587928 CUST_10555_PI390587928 CUST_3874_PI390587928 CUST_13668_PI390587928 CUST_37063_PI390587928 CUST_7653_PI390587928 CUST_22637_PI390587928 CUST_7656_PI390587928 CUST_7637_PI390587928 CUST_13640_PI390587928 CUST_13648_PI390587928 CUST_34597_PI390587928 CUST_4630_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC52611 ABC52892 ABC53012
MLOC_41153.1	218	3e-78	1 - 212	92	195 / 212	None	ABC00295 ABC00502 ABC00524 ABC00765 ABC00815 ABC00822
MLOC_47722.1	241	1e-76	1 - 241	88	215 / 243	None	ABC00295 ABC00502 ABC00523 ABC00524 ABC00530 ABC00765 ABC00785 ABC00811 ABC00815 ABC00822
MLOC_22495.1	518	5e-71	1 - 352	81	298 / 366	None	ABC00815