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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_2503_PI390587928Hv_44K_v2CAAGTTGGACAATGTTCTTTCCAACAACCTCAACCACAACAACTTGGTCAAGCACAACAG642GeneList: black
MasterList: Hordein_Function_Probe_Module



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0130.0130.1472.5455.4988.148
Raw 58.38482.9031284.84831624.80024783.30040297.400



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_22496.19983e-21494 - 5539758 / 60minus ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC52892 ABC53012
MLOCMLOC_6381.110353e-21320 - 3799758 / 60minus ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012
JLOC1JLOC1_15597.18602e-21356 - 4159758 / 60minus
JLOC1JLOC1_4154.110672e-21343 - 4029758 / 60minus
Harvest21ABC379196023e-25357 - 41610060 / 60minusABC37919
Harvest21ABC344616333e-25511 - 57010060 / 60plus
Harvest21ABC341377023e-25643 - 70210060 / 60plus
Harvest21ABC0081814113e-25972 - 103110060 / 60plus
Harvest21ABC005859203e-25566 - 62510060 / 60plusABC00585
Harvest21ABC002585973e-25528 - 58710060 / 60plus
Harvest21ABC436896296e-2298 - 1579758 / 60plus
Harvest21ABC005169936e-22590 - 6499758 / 60plusABC00516
Harvest21ABC0024111196e-22720 - 7799758 / 60plusABC00241
Harvest21ABC000699636e-22565 - 6249758 / 60plusABC00069
Harvest21ABC007859992e-21602 - 6609757 / 59plusABC00785
Harvest21ABC007957858e-21728 - 7829854 / 55plus
Harvest35U35_384776333e-25511 - 57010060 / 60plus
Harvest35U35_382497023e-25643 - 70210060 / 60plus
Harvest35U35_33913793e-25972 - 103110060 / 60plus
Harvest35U35_876023e-25533 - 59210060 / 60plus
Harvest35U35_7911206e-22720 - 7799758 / 60plus
Harvest35U35_259396e-22565 - 6249758 / 60plus
Harvest35U35_3197242e-21602 - 6609757 / 59plus
Harvest35U35_2136388e-21584 - 6389854 / 55plus



Contig Sequence (702 bp)

>U35_38249 702 Hv_44K_v2
GCCACCATGAAGACCTTCCTCATCTTTGCACTCCTCGCCATTGTGGCAACAAGTACCATT
GCACAGCAACAACCATACCCACAACAACCACAACCATATCCACAACAACCATTCCAACCG
CAACAACCATTTCCACAACAAACCATCCCACAACAACCACAACCATATCCACAACAACCC
TTCCCACCGCAACAAGAATTTCCACAACAACCACCATTTTGGCCACAACAACCATTTCCA
CAGCAACCACCATTTGGGCTACAACAACCAATTCTATCGCAGCAACAACCATGTACACCA
CAACAAACACCACTCCCACAAGGACAACTGTATCAAACGCTTCTGCAACTACAAATACCC
TATGTTCATCCATCTATATTGCAACAGCTAAACCCATGCAAGGTATTCCTCCAGCAGCAG
TGCAGCCCCGTGCGAATGCCACAACTTATTGCTAGGTTGCAAATGTTGCAGCAGAGCAGT
TGCCATGTGTTGCAGCAACAATGTTGCCAGCAACTGCCGCAAATCTCCGAACAATTCCGC
CATGAGGCAATCCGTGCAATCGTCTACTCTATCTTTCTGCAAGAACAACCCCAACAGTCG
GTCCAAGGTGTATCCCAAACCCAACAACAGTTGCAGCAGGAGCAAGTTGGACAATGTTCT
TTCCAACAACCTCAACCACAACAACTTGGTCAAGCACAACAG



Homology of Contig U35_38249 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None