barSeed - Barley Seed Development Database

Probe ABC00524

Source Contig ABC00524

barSeed

Links

Affymetrix Source Sequence (874 bp)

>ABC00524 874
TAAATAGGCAGGTAGTATAGAGATCATCACAAGCACGAGGATCAAAACCAAGAAACACTA
GTTAACACCAATCCACTATGAAGACCTTCCTCATCTTTGCACTCCTCGCCATTGCGGCAA
CAAGTACGATTGCACAGCAACAACCATTTCCACAACAACCCATCCCACAACAGCCACAAC
CATACCCACAACAACCACAACCATATCCACAACAACCCTTCCAACCGCAACAACCATTTC
CACAACAAACCATCCCACAACAACCACAACAACCACAACCATATCCACAACAACCCTTCC
CACCGCAACAAGCATTTCCACAACAACCACCATTTTGGCCACAACAACCATTTCCACAGC
AACCACCATTTGGGCTACAACAACCAATTCTATCGCAACAACAACCATGTACACCACAAC
AAACACCACTCCCACAAGGACAACTGTACCAAACGCTTCTGCAACTACAAATACCCTATG
TTCAACCATCTATTTTGCAACAGCTAAACCCATGCAAGGTATTCCTCCAGCAGCAGTGCA
GCCCCGTGCGAATGCCACAACTTATTGCTAGGTCGCAAATGTTGCAGCAGAGCAGTTGCC
ATGTGTTGCAGCAACAATGTTGCCAGCAACTGCCGCAAATCCCCGAACAATTCCGCCATG
AGGCAATCCGTGCAATCGTCTACTCTATCTTTCTGCAAGAACAACCCCAACAGTCGGTCC
AAGGTGTCTCCCAACCCCAACAACAGTTGCAGCAGGAGCAAGTCGGACAATGTTATTTCC
AACAACCTCAACCACAACAACTTGGTCAACCACAACAGGTACCACAGAGTGTTTTCTTGC
AGCCACACCAGATAGCTCAGCTTGAGGCGACGAC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_22764.1	1083	0.0	243 - 1083	99	837 / 841	CUST_11194_PI390587928 CUST_22657_PI390587928 CUST_22851_PI390587928 CUST_37700_PI390587928 CUST_13612_PI390587928 CUST_41660_PI390587928 CUST_23494_PI390587928 CUST_13627_PI390587928 CUST_22614_PI390587928 CUST_15916_PI390587928 CUST_16069_PI390587928 CUST_7641_PI390587928 CUST_37667_PI390587928 CUST_7619_PI390587928 CUST_11910_PI390587928 CUST_37671_PI390587928 CUST_37060_PI390587928	ABC00069 ABC00241 ABC00282 ABC00295 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC53012
MLOC_6381.1	1035	0.0	264 - 1035	96	743 / 772	CUST_6741_PI390587928 CUST_11194_PI390587928 CUST_22657_PI390587928 CUST_2503_PI390587928 CUST_37700_PI390587928 CUST_13638_PI390587928 CUST_41660_PI390587928 CUST_31646_PI390587928 CUST_13627_PI390587928 CUST_22614_PI390587928 CUST_7621_PI390587928 CUST_32236_PI390587928 CUST_32375_PI390587928 CUST_13615_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_26608_PI390587928 CUST_40753_PI390587928 CUST_15916_PI390587928 CUST_32897_PI390587928 CUST_3904_PI390587928 CUST_16069_PI390587928 CUST_37662_PI390587928 CUST_7629_PI390587928 CUST_7641_PI390587928 CUST_37667_PI390587928 CUST_32234_PI390587928 CUST_37060_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012
MLOC_75622.1	1651	0.0	1019 - 1629	96	585 / 611	CUST_6741_PI390587928 CUST_25329_PI390587928 CUST_37700_PI390587928 CUST_13624_PI390587928 CUST_17015_PI390587928 CUST_31646_PI390587928 CUST_13651_PI390587928 CUST_13632_PI390587928 CUST_1122_PI390587928 CUST_7621_PI390587928 CUST_13671_PI390587928 CUST_32375_PI390587928 CUST_37704_PI390587928 CUST_34593_PI390587928 CUST_22790_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_34191_PI390587928 CUST_3902_PI390587928 CUST_7659_PI390587928 CUST_7629_PI390587928 CUST_3896_PI390587928 CUST_26369_PI390587928 CUST_1125_PI390587928 CUST_7658_PI390587928 CUST_4629_PI390587928 CUST_13625_PI390587928 CUST_32236_PI390587928 CUST_41658_PI390587928 CUST_7618_PI390587928 CUST_37701_PI390587928 CUST_13670_PI390587928 CUST_26608_PI390587928 CUST_40753_PI390587928 CUST_7631_PI390587928 CUST_17013_PI390587928 CUST_32897_PI390587928 CUST_3904_PI390587928 CUST_41697_PI390587928 CUST_11910_PI390587928 CUST_32234_PI390587928 CUST_37060_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012
MLOC_22496.1	998	0.0	438 - 998	97	543 / 561	CUST_11194_PI390587928 CUST_2503_PI390587928 CUST_22851_PI390587928 CUST_37700_PI390587928 CUST_13638_PI390587928 CUST_41660_PI390587928 CUST_13632_PI390587928 CUST_22614_PI390587928 CUST_37704_PI390587928 CUST_37697_PI390587928 CUST_37662_PI390587928 CUST_37667_PI390587928 CUST_22657_PI390587928 CUST_4629_PI390587928 CUST_13627_PI390587928 CUST_37062_PI390587928 CUST_13670_PI390587928 CUST_15916_PI390587928 CUST_4631_PI390587928 CUST_16069_PI390587928 CUST_7641_PI390587928 CUST_37671_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC52892 ABC53012
MLOC_46003.1	1379	0.0	1 - 471	95	449 / 471	CUST_6741_PI390587928 CUST_13624_PI390587928 CUST_41660_PI390587928 CUST_31646_PI390587928 CUST_13651_PI390587928 CUST_13632_PI390587928 CUST_22614_PI390587928 CUST_7621_PI390587928 CUST_13671_PI390587928 CUST_32375_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_7659_PI390587928 CUST_13666_PI390587928 CUST_7629_PI390587928 CUST_22657_PI390587928 CUST_13627_PI390587928 CUST_32236_PI390587928 CUST_13670_PI390587928 CUST_7631_PI390587928 CUST_32897_PI390587928 CUST_3904_PI390587928 CUST_16069_PI390587928 CUST_32234_PI390587928 CUST_13662_PI390587928 CUST_37060_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012
MLOC_47363.1	407	2e-164	1 - 407	92	376 / 407	CUST_6741_PI390587928 CUST_25329_PI390587928 CUST_37700_PI390587928 CUST_17015_PI390587928 CUST_31646_PI390587928 CUST_1122_PI390587928 CUST_7621_PI390587928 CUST_32375_PI390587928 CUST_22790_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_34191_PI390587928 CUST_3902_PI390587928 CUST_7629_PI390587928 CUST_3896_PI390587928 CUST_26369_PI390587928 CUST_1125_PI390587928 CUST_7658_PI390587928 CUST_32236_PI390587928 CUST_41658_PI390587928 CUST_37062_PI390587928 CUST_7618_PI390587928 CUST_13625_PI390587928 CUST_37701_PI390587928 CUST_17013_PI390587928 CUST_32897_PI390587928 CUST_4631_PI390587928 CUST_3904_PI390587928 CUST_41697_PI390587928 CUST_32234_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012
MLOC_47377.1	720	7e-145	347 - 720	92	343 / 374	None	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC32263 ABC37919 ABC53012
MLOC_30835.1	717	5e-136	1 - 361	91	331 / 364	CUST_37669_PI390587928 CUST_37660_PI390587928 CUST_7655_PI390587928 CUST_40697_PI390587928 CUST_13668_PI390587928 CUST_37063_PI390587928 CUST_22637_PI390587928 CUST_7637_PI390587928 CUST_34597_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC52892 ABC53012
MLOC_28499.1	321	3e-128	1 - 321	93	297 / 321	CUST_6741_PI390587928 CUST_25329_PI390587928 CUST_17015_PI390587928 CUST_31646_PI390587928 CUST_1122_PI390587928 CUST_7621_PI390587928 CUST_32375_PI390587928 CUST_13646_PI390587928 CUST_22790_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_34191_PI390587928 CUST_3902_PI390587928 CUST_7629_PI390587928 CUST_3896_PI390587928 CUST_26369_PI390587928 CUST_1125_PI390587928 CUST_7658_PI390587928 CUST_32236_PI390587928 CUST_41658_PI390587928 CUST_37062_PI390587928 CUST_7618_PI390587928 CUST_13625_PI390587928 CUST_37701_PI390587928 CUST_17013_PI390587928 CUST_32897_PI390587928 CUST_4631_PI390587928 CUST_3904_PI390587928 CUST_41697_PI390587928 CUST_32234_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012
MLOC_65457.1	295	2e-90	1 - 291	87	257 / 294	CUST_6741_PI390587928 CUST_31646_PI390587928 CUST_7621_PI390587928 CUST_32375_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_7629_PI390587928 CUST_32236_PI390587928 CUST_40719_PI390587928 CUST_32897_PI390587928 CUST_3904_PI390587928 CUST_32234_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00585 ABC00711 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012
MLOC_27672.1	236	3e-88	3 - 236	92	215 / 234	CUST_25329_PI390587928 CUST_17015_PI390587928 CUST_1122_PI390587928 CUST_13646_PI390587928 CUST_22790_PI390587928 CUST_34191_PI390587928 CUST_3902_PI390587928 CUST_3896_PI390587928 CUST_26369_PI390587928 CUST_1125_PI390587928 CUST_7658_PI390587928 CUST_37062_PI390587928 CUST_41658_PI390587928 CUST_7618_PI390587928 CUST_13625_PI390587928 CUST_37701_PI390587928 CUST_17013_PI390587928 CUST_4631_PI390587928 CUST_41697_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012
MLOC_29313.1	265	2e-85	70 - 265	96	188 / 196	None	ABC00241 ABC00282 ABC00523 ABC00524 ABC00540 ABC00815 ABC00822
MLOC_25576.1	359	1e-77	1 - 311	84	264 / 315	CUST_6741_PI390587928 CUST_31646_PI390587928 CUST_7621_PI390587928 CUST_32375_PI390587928 CUST_13664_PI390587928 CUST_3883_PI390587928 CUST_7629_PI390587928 CUST_32236_PI390587928 CUST_32897_PI390587928 CUST_3904_PI390587928 CUST_32234_PI390587928	ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012
MLOC_47722.1	241	7e-65	32 - 241	88	187 / 212	None	ABC00295 ABC00502 ABC00523 ABC00524 ABC00530 ABC00765 ABC00785 ABC00811 ABC00815 ABC00822
MLOC_57151.1	595	9e-64	1 - 217	87	191 / 219	None	ABC00295 ABC00301 ABC00502 ABC00523 ABC00524 ABC00530 ABC00765 ABC00785 ABC00811 ABC00815 ABC00822
MLOC_41153.1	218	2e-55	53 - 212	91	146 / 160	None	ABC00295 ABC00502 ABC00524 ABC00765 ABC00815 ABC00822