- Probe CUST_26608_PI390587928
- Source Contig U35_50517
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_26608_PI390587928 | Hv_44K_v2 | TATTGCTAGGTTGCAAATGTTGCAGCTGAGCAGTTGCCATGTGTTGCAGCAACAATGTTG | 484 | GeneList: black MasterList: Hordein_Function_Probe_Module |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.011 | 0.012 | 0.143 | 2.724 | 6.548 | 10.691 |
| Raw | 10.633 | 16.134 | 293.556 | 8247.887 | 6985.740 | 12429.667 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_75622.1 | 1651 | 3e-21 | 1271 - 1330 | 97 | 58 / 60 | minus | ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012 |
| MLOC | MLOC_6381.1 | 1035 | 3e-21 | 516 - 575 | 97 | 58 / 60 | minus | ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012 |
| JLOC1 | JLOC1_50450.1 | 1084 | 2e-21 | 704 - 763 | 97 | 58 / 60 | minus | |
| JLOC1 | JLOC1_4154.1 | 1067 | 2e-21 | 539 - 598 | 97 | 58 / 60 | minus | |
| Harvest21 | ABC52908 | 578 | 3e-25 | 459 - 518 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC52824 | 427 | 3e-25 | 337 - 396 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC52821 | 563 | 3e-25 | 411 - 470 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC52780 | 668 | 3e-25 | 435 - 494 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC52772 | 597 | 3e-25 | 435 - 494 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC52700 | 548 | 3e-25 | 485 - 544 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00798 | 631 | 3e-25 | 425 - 484 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00795 | 785 | 3e-25 | 531 - 590 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00785 | 999 | 3e-25 | 405 - 464 | 100 | 60 / 60 | plus | ABC00785 |
| Harvest21 | ABC34461 | 633 | 1e-23 | 315 - 374 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC34159 | 548 | 1e-23 | 345 - 404 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC34137 | 702 | 1e-23 | 447 - 506 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC34056 | 620 | 1e-23 | 421 - 480 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC33110 | 491 | 1e-23 | 302 - 361 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC32452 | 588 | 1e-23 | 503 - 562 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC32292 | 582 | 1e-23 | 379 - 438 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC00818 | 1411 | 1e-23 | 776 - 835 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC00258 | 597 | 1e-23 | 332 - 391 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC00252 | 701 | 1e-23 | 460 - 519 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC53012 | 868 | 6e-22 | 328 - 387 | 97 | 58 / 60 | plus | ABC53012 |
| Harvest21 | ABC45271 | 329 | 6e-22 | 243 - 302 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC44715 | 490 | 6e-22 | 419 - 478 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC43627 | 629 | 6e-22 | 435 - 494 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC34277 | 573 | 6e-22 | 457 - 516 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC32998 | 547 | 6e-22 | 282 - 341 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC32843 | 565 | 6e-22 | 338 - 397 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC32822 | 570 | 6e-22 | 367 - 426 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00815 | 2900 | 6e-22 | 1040 - 1099 | 97 | 58 / 60 | plus | ABC00815 |
| Harvest21 | ABC00763 | 763 | 6e-22 | 498 - 557 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00585 | 920 | 6e-22 | 370 - 429 | 97 | 58 / 60 | plus | ABC00585 |
| Harvest21 | ABC00582 | 689 | 6e-22 | 309 - 368 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00560 | 971 | 6e-22 | 401 - 460 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00548 | 638 | 6e-22 | 389 - 448 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00543 | 1036 | 6e-22 | 432 - 491 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00529 | 804 | 6e-22 | 242 - 301 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00528 | 602 | 6e-22 | 253 - 312 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00524 | 874 | 6e-22 | 563 - 622 | 97 | 58 / 60 | plus | ABC00524 |
| Harvest21 | ABC00508 | 596 | 6e-22 | 378 - 437 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00296 | 861 | 6e-22 | 393 - 452 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00292 | 684 | 6e-22 | 391 - 450 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00285 | 1008 | 6e-22 | 407 - 466 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00266 | 565 | 6e-22 | 356 - 415 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00264 | 895 | 6e-22 | 517 - 576 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00241 | 1119 | 6e-22 | 524 - 583 | 97 | 58 / 60 | plus | ABC00241 |
| Harvest21 | ABC00240 | 798 | 6e-22 | 387 - 446 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00232 | 1132 | 6e-22 | 547 - 606 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00214 | 698 | 6e-22 | 380 - 439 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_50642 | 578 | 3e-25 | 459 - 518 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_50517 | 548 | 3e-25 | 485 - 544 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_327 | 631 | 3e-25 | 425 - 484 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_319 | 724 | 3e-25 | 405 - 464 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_38477 | 633 | 1e-23 | 315 - 374 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_38249 | 702 | 1e-23 | 447 - 506 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_38194 | 620 | 1e-23 | 421 - 480 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_339 | 1379 | 1e-23 | 776 - 835 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_87 | 602 | 1e-23 | 337 - 396 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_84 | 701 | 1e-23 | 460 - 519 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_45148 | 629 | 6e-22 | 435 - 494 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_38169 | 608 | 6e-22 | 407 - 466 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_37256 | 547 | 6e-22 | 282 - 341 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_37155 | 570 | 6e-22 | 367 - 426 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_342 | 1417 | 6e-22 | 832 - 891 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_337 | 2900 | 6e-22 | 1040 - 1099 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_226 | 691 | 6e-22 | 309 - 368 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_213 | 638 | 6e-22 | 388 - 447 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_202 | 652 | 6e-22 | 242 - 301 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_198 | 598 | 6e-22 | 378 - 437 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_114 | 974 | 6e-22 | 391 - 450 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_90 | 565 | 6e-22 | 356 - 415 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_79 | 1120 | 6e-22 | 524 - 583 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_78 | 488 | 6e-22 | 387 - 446 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_75 | 1141 | 6e-22 | 544 - 603 | 97 | 58 / 60 | plus |
Contig Sequence (548 bp)
>U35_50517 548 Hv_44K_v2 CTAGTTAACACCAATCCACCATGAAGACCTTCCTCATCTTTGCACTCCTGGCCATTGCGG CAACAAGTACGATTGCGCAGCAACAACCACTTCCGCAACAACCCATCCCACAAAAACCAC AACCATACCCACAACAACCCTTCCCACCGCAACAACCATTTCCACAACAACCCGTCCCAC AACAACCACAACCATACCCACAACAACCACAACAACCCTTCCCACCGCAACAACCATTTC CACAACAACCACCATTTTGGCCACAACAACCATTTCCACAGCAACCACCATTTGGGCTAC AACAACGAATTCTATCGCAGCAACAACCATGTACACCACAACAAACACCACTCCCACAAG GACAACTGTATCAAACGCTTCTGCAACTACAAATACCCTATGTTCATCCATCTATTTTGC AACAGCTAAACCCATGCAAGGTATTCCTCCAGCAGCAGTGCAGCCCCGTGCGAATGCCAC AACTTATTGCTAGGTTGCAAATGTTGCAGCTGAGCAGTTGCCATGTGTTGCAGCAACAAT GTTGCCAG
Homology of Contig U35_50517 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |