- Probe CUST_13627_PI390587928
- Source Contig U35_327
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_13627_PI390587928 | Hv_44K_v2 | AACAATTCCGCCATGAGGCAATCCGTGCAATCGTCTACTCTATCTTTCTGCAAGAACAAC | 507 | GeneList: black MasterList: Hordein_Function_Probe_Module |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.013 | 0.013 | 0.157 | 2.579 | 6.024 | 9.044 |
| Raw | 55.353 | 89.528 | 1543.230 | 36287.200 | 30571.100 | 50830.333 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_22764.1 | 1083 | 2e-24 | 412 - 471 | 100 | 60 / 60 | minus | ABC00069 ABC00241 ABC00282 ABC00295 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC53012 |
| MLOC | MLOC_6381.1 | 1035 | 2e-24 | 433 - 492 | 100 | 60 / 60 | minus | ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012 |
| MLOC | MLOC_46003.1 | 1379 | 3e-21 | 243 - 302 | 97 | 58 / 60 | plus | ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012 |
| MLOC | MLOC_22496.1 | 998 | 3e-21 | 607 - 666 | 97 | 58 / 60 | minus | ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC52892 ABC53012 |
| JLOC1 | JLOC1_15771.1 | 1131 | 8e-25 | 460 - 519 | 100 | 60 / 60 | minus | |
| JLOC1 | JLOC1_4154.1 | 1067 | 8e-25 | 456 - 515 | 100 | 60 / 60 | minus | |
| JLOC1 | JLOC1_29821.1 | 840 | 2e-21 | 243 - 302 | 97 | 58 / 60 | plus | |
| JLOC1 | JLOC1_29820.1 | 602 | 2e-21 | 301 - 360 | 97 | 58 / 60 | minus | |
| JLOC1 | JLOC1_15597.1 | 860 | 2e-21 | 469 - 528 | 97 | 58 / 60 | minus | |
| JLOC1 | JLOC1_30556.1 | 854 | 6e-21 | 447 - 505 | 97 | 57 / 59 | minus | |
| Harvest21 | ABC52780 | 668 | 3e-25 | 518 - 577 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC52772 | 597 | 3e-25 | 518 - 577 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC45027 | 540 | 3e-25 | 384 - 443 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC43627 | 629 | 3e-25 | 518 - 577 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC34461 | 633 | 3e-25 | 398 - 457 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC34159 | 548 | 3e-25 | 428 - 487 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC34137 | 702 | 3e-25 | 530 - 589 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC34056 | 620 | 3e-25 | 504 - 563 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC33110 | 491 | 3e-25 | 385 - 444 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC32998 | 547 | 3e-25 | 365 - 424 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC32822 | 570 | 3e-25 | 450 - 509 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC32670 | 450 | 3e-25 | 332 - 391 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC32454 | 684 | 3e-25 | 512 - 571 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC32292 | 582 | 3e-25 | 462 - 521 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00822 | 1417 | 3e-25 | 915 - 974 | 100 | 60 / 60 | plus | ABC00822 |
| Harvest21 | ABC00818 | 1411 | 3e-25 | 859 - 918 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00798 | 631 | 3e-25 | 508 - 567 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00795 | 785 | 3e-25 | 614 - 673 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00785 | 999 | 3e-25 | 488 - 547 | 100 | 60 / 60 | plus | ABC00785 |
| Harvest21 | ABC00763 | 763 | 3e-25 | 581 - 640 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00585 | 920 | 3e-25 | 453 - 512 | 100 | 60 / 60 | plus | ABC00585 |
| Harvest21 | ABC00582 | 689 | 3e-25 | 392 - 451 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00548 | 638 | 3e-25 | 472 - 531 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00543 | 1036 | 3e-25 | 515 - 574 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00524 | 874 | 3e-25 | 646 - 705 | 100 | 60 / 60 | plus | ABC00524 |
| Harvest21 | ABC00296 | 861 | 3e-25 | 476 - 535 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00292 | 684 | 3e-25 | 474 - 533 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00285 | 1008 | 3e-25 | 490 - 549 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00269 | 768 | 3e-25 | 589 - 648 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00264 | 895 | 3e-25 | 600 - 659 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00258 | 597 | 3e-25 | 415 - 474 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00252 | 701 | 3e-25 | 543 - 602 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00243 | 589 | 3e-25 | 403 - 462 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00240 | 798 | 3e-25 | 470 - 529 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00237 | 734 | 3e-25 | 61 - 120 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC00232 | 1132 | 3e-25 | 630 - 689 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00214 | 698 | 3e-25 | 463 - 522 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC32843 | 565 | 1e-23 | 421 - 480 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC00266 | 565 | 1e-23 | 439 - 498 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC00241 | 1119 | 1e-23 | 607 - 666 | 98 | 59 / 60 | plus | ABC00241 |
| Harvest21 | ABC52821 | 563 | 5e-23 | 494 - 552 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC52905 | 672 | 6e-22 | 407 - 466 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC52828 | 530 | 6e-22 | 368 - 427 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC52707 | 645 | 6e-22 | 358 - 417 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC52706 | 589 | 6e-22 | 425 - 484 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC45510 | 231 | 6e-22 | 60 - 119 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC32538 | 494 | 6e-22 | 66 - 125 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00805 | 671 | 6e-22 | 482 - 541 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00789 | 1072 | 6e-22 | 565 - 624 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00762 | 693 | 6e-22 | 503 - 562 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00759 | 830 | 6e-22 | 503 - 562 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00751 | 669 | 6e-22 | 412 - 471 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00559 | 906 | 6e-22 | 401 - 460 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC00516 | 993 | 6e-22 | 477 - 536 | 97 | 58 / 60 | plus | ABC00516 |
| Harvest21 | ABC00282 | 1112 | 6e-22 | 605 - 664 | 97 | 58 / 60 | plus | ABC00282 |
| Harvest21 | ABC00069 | 963 | 6e-22 | 452 - 511 | 97 | 58 / 60 | plus | ABC00069 |
| Harvest35 | U35_45148 | 629 | 3e-25 | 518 - 577 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_38477 | 633 | 3e-25 | 398 - 457 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_38249 | 702 | 3e-25 | 530 - 589 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_38194 | 620 | 3e-25 | 504 - 563 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_38169 | 608 | 3e-25 | 490 - 549 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_37256 | 547 | 3e-25 | 365 - 424 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_37155 | 570 | 3e-25 | 450 - 509 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_342 | 1417 | 3e-25 | 915 - 974 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_339 | 1379 | 3e-25 | 859 - 918 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_327 | 631 | 3e-25 | 508 - 567 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_319 | 724 | 3e-25 | 488 - 547 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_226 | 691 | 3e-25 | 392 - 451 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_213 | 638 | 3e-25 | 471 - 530 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_114 | 974 | 3e-25 | 474 - 533 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_87 | 602 | 3e-25 | 420 - 479 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_84 | 701 | 3e-25 | 543 - 602 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_81 | 589 | 3e-25 | 403 - 462 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_75 | 1141 | 3e-25 | 627 - 686 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_90 | 565 | 1e-23 | 439 - 498 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_79 | 1120 | 1e-23 | 607 - 666 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_330 | 671 | 6e-22 | 482 - 541 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_321 | 1089 | 6e-22 | 565 - 624 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_312 | 1046 | 6e-22 | 781 - 840 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_306 | 693 | 6e-22 | 503 - 562 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_304 | 577 | 6e-22 | 503 - 562 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_300 | 669 | 6e-22 | 412 - 471 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_218 | 599 | 6e-22 | 401 - 460 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_25 | 939 | 6e-22 | 452 - 511 | 97 | 58 / 60 | plus |
Contig Sequence (631 bp)
>U35_327 631 Hv_44K_v2 ACACTAGTTAACACCAATCCACTATGAAGACCTTCCTCATCTTTGCACTCCTCGTCATTG CGGCAACAAGTACGATTGCACAGCAACAACCATTTCCACAACAACCCTTCCCCCAACAGC CACAACCATACCCACAACAACCACAACCATATCCACAACAACCATTCCAACCGCAACAAC CATTTCCACAACAAACCATCCCACAACAACCACAACCATACCCACAACAACCACAACCAT ATCCACAACAACCCTTCCCACCGCAACAAGAATTTCCACAACAAACACCACTCCCACAAG GACAACTGTATCAAACGCTTCTGCAACTACAAATACCCTATGTTCATCCATCTATTTTGC AACAGCTAAACCCATGCAAGGTATTCCTCCAGCAGCAGTGCAGCCCCGTGCGAATGCCAC AACTTATTGCTAGGTTGCAAATGTTGCAGCTGAGCAGTTGCCATGTGTTGCAGCAACAAT GTTGCCAGCAACTGCCGCAAATCTCCGAACAATTCCGCCATGAGGCAATCCGTGCAATCG TCTACTCTATCTTTCTGCAAGAACAACCCCAACAGTCGGTCCAAGGTGTATCCCAAACCC AACAACAGTTGCAGCAGGAGAAAGTTGGACA
Homology of Contig U35_327 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |