- Probe CUST_13625_PI390587928
- Source Contig U35_329
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_13625_PI390587928 | Hv_44K_v2 | TATTGCAAGGTCGCAAATGTTGCAACAGAGCAGTTGCCATGTGTTGCAGCAACAATGTTG | 484 | GeneList: black MasterList: Hordein_Function_Probe_Module |
Probe Values
3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
---|---|---|---|---|---|---|
Normalized | 0.011 | 0.012 | 0.152 | 2.505 | 5.228 | 8.504 |
Raw | 11.323 | 21.827 | 398.558 | 9662.133 | 7076.247 | 12681.360 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | MLOC_28499.1 | 321 | 2e-24 | 85 - 144 | 100 | 60 / 60 | plus | ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012 |
MLOC | MLOC_47363.1 | 407 | 7e-23 | 158 - 217 | 98 | 59 / 60 | minus | ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012 |
MLOC | MLOC_27672.1 | 236 | 7e-23 | 15 - 74 | 98 | 59 / 60 | plus | ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00815 ABC00822 ABC53012 |
MLOC | MLOC_75622.1 | 1651 | 3e-21 | 1271 - 1330 | 97 | 58 / 60 | minus | ABC00069 ABC00241 ABC00282 ABC00301 ABC00502 ABC00516 ABC00523 ABC00524 ABC00530 ABC00540 ABC00549 ABC00567 ABC00585 ABC00765 ABC00785 ABC00793 ABC00811 ABC00815 ABC00822 ABC32263 ABC32949 ABC37919 ABC44727 ABC53012 |
JLOC1 | JLOC1_19111.1 | 321 | 8e-25 | 85 - 144 | 100 | 60 / 60 | plus | |
JLOC1 | JLOC1_30552.1 | 407 | 4e-23 | 158 - 217 | 98 | 59 / 60 | minus | |
JLOC1 | JLOC1_18660.1 | 236 | 4e-23 | 15 - 74 | 98 | 59 / 60 | plus | |
JLOC1 | JLOC1_50450.1 | 1084 | 2e-21 | 704 - 763 | 97 | 58 / 60 | minus | |
Harvest21 | ABC45296 | 454 | 3e-25 | 385 - 444 | 100 | 60 / 60 | plus | |
Harvest21 | ABC45054 | 661 | 3e-25 | 466 - 525 | 100 | 60 / 60 | plus | |
Harvest21 | ABC43850 | 600 | 3e-25 | 339 - 398 | 100 | 60 / 60 | plus | |
Harvest21 | ABC43599 | 457 | 3e-25 | 386 - 445 | 100 | 60 / 60 | plus | |
Harvest21 | ABC43556 | 512 | 3e-25 | 310 - 369 | 100 | 60 / 60 | plus | |
Harvest21 | ABC34484 | 676 | 3e-25 | 220 - 279 | 100 | 60 / 60 | plus | |
Harvest21 | ABC34437 | 730 | 3e-25 | 508 - 567 | 100 | 60 / 60 | plus | |
Harvest21 | ABC34324 | 711 | 3e-25 | 366 - 425 | 100 | 60 / 60 | plus | |
Harvest21 | ABC34302 | 692 | 3e-25 | 442 - 501 | 100 | 60 / 60 | plus | |
Harvest21 | ABC34299 | 678 | 3e-25 | 255 - 314 | 100 | 60 / 60 | plus | |
Harvest21 | ABC34033 | 632 | 3e-25 | 172 - 231 | 100 | 60 / 60 | plus | |
Harvest21 | ABC33042 | 660 | 3e-25 | 500 - 559 | 100 | 60 / 60 | plus | |
Harvest21 | ABC32931 | 522 | 3e-25 | 330 - 389 | 100 | 60 / 60 | plus | |
Harvest21 | ABC32929 | 551 | 3e-25 | 482 - 541 | 100 | 60 / 60 | plus | |
Harvest21 | ABC32832 | 508 | 3e-25 | 309 - 368 | 100 | 60 / 60 | plus | |
Harvest21 | ABC32804 | 541 | 3e-25 | 442 - 501 | 100 | 60 / 60 | plus | |
Harvest21 | ABC32652 | 628 | 3e-25 | 484 - 543 | 100 | 60 / 60 | plus | |
Harvest21 | ABC32270 | 468 | 3e-25 | 265 - 324 | 100 | 60 / 60 | plus | |
Harvest21 | ABC29837 | 681 | 3e-25 | 386 - 445 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00781 | 1172 | 3e-25 | 573 - 632 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00761 | 832 | 3e-25 | 594 - 653 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00574 | 502 | 3e-25 | 375 - 434 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00534 | 545 | 3e-25 | 385 - 444 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00531 | 704 | 3e-25 | 332 - 391 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00530 | 1096 | 3e-25 | 512 - 571 | 100 | 60 / 60 | plus | ABC00530 |
Harvest21 | ABC00523 | 1235 | 3e-25 | 637 - 696 | 100 | 60 / 60 | plus | ABC00523 |
Harvest21 | ABC00506 | 1202 | 3e-25 | 609 - 668 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00505 | 620 | 3e-25 | 419 - 478 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00304 | 437 | 3e-25 | 306 - 365 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00302 | 713 | 3e-25 | 370 - 429 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00301 | 970 | 3e-25 | 378 - 437 | 100 | 60 / 60 | plus | ABC00301 |
Harvest21 | ABC00287 | 630 | 3e-25 | 504 - 563 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00283 | 671 | 3e-25 | 470 - 529 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00259 | 1011 | 3e-25 | 423 - 482 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00256 | 591 | 3e-25 | 465 - 524 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00247 | 580 | 3e-25 | 479 - 538 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00244 | 620 | 3e-25 | 488 - 547 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00211 | 1515 | 3e-25 | 599 - 658 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00022 | 505 | 3e-25 | 410 - 469 | 100 | 60 / 60 | plus | |
Harvest21 | ABC00248 | 547 | 4e-24 | 485 - 544 | 98 | 59 / 60 | plus | |
Harvest21 | ABC43838 | 197 | 1e-23 | 141 - 197 | 100 | 57 / 57 | plus | |
Harvest21 | ABC43566 | 482 | 1e-23 | 426 - 482 | 100 | 57 / 57 | plus | |
Harvest21 | ABC33106 | 528 | 1e-23 | 472 - 528 | 100 | 57 / 57 | plus | |
Harvest21 | ABC29829 | 634 | 1e-23 | 398 - 457 | 98 | 59 / 60 | plus | |
Harvest21 | ABC28956 | 605 | 1e-23 | 393 - 452 | 98 | 59 / 60 | plus | |
Harvest21 | ABC00772 | 662 | 1e-23 | 462 - 521 | 98 | 59 / 60 | plus | |
Harvest21 | ABC00765 | 1240 | 1e-23 | 706 - 765 | 98 | 59 / 60 | plus | ABC00765 |
Harvest21 | ABC00577 | 1091 | 1e-23 | 496 - 555 | 98 | 59 / 60 | plus | |
Harvest21 | ABC00563 | 650 | 1e-23 | 365 - 424 | 98 | 59 / 60 | plus | |
Harvest21 | ABC00552 | 535 | 1e-23 | 402 - 461 | 98 | 59 / 60 | plus | |
Harvest21 | ABC00549 | 868 | 1e-23 | 332 - 391 | 98 | 59 / 60 | plus | ABC00549 |
Harvest21 | ABC00540 | 977 | 1e-23 | 389 - 448 | 98 | 59 / 60 | plus | ABC00540 |
Harvest21 | ABC00289 | 622 | 1e-23 | 506 - 565 | 98 | 59 / 60 | plus | |
Harvest21 | ABC00246 | 597 | 1e-23 | 483 - 542 | 98 | 59 / 60 | plus | |
Harvest21 | ABC32600 | 421 | 2e-22 | 365 - 421 | 98 | 56 / 57 | plus | |
Harvest21 | ABC53012 | 868 | 6e-22 | 328 - 387 | 97 | 58 / 60 | plus | ABC53012 |
Harvest21 | ABC52900 | 358 | 6e-22 | 257 - 316 | 97 | 58 / 60 | plus | |
Harvest21 | ABC45271 | 329 | 6e-22 | 243 - 302 | 97 | 58 / 60 | plus | |
Harvest21 | ABC44715 | 490 | 6e-22 | 419 - 478 | 97 | 58 / 60 | plus | |
Harvest21 | ABC43735 | 571 | 6e-22 | 219 - 278 | 97 | 58 / 60 | plus | |
Harvest21 | ABC34497 | 661 | 6e-22 | 511 - 570 | 97 | 58 / 60 | plus | |
Harvest21 | ABC34277 | 573 | 6e-22 | 457 - 516 | 97 | 58 / 60 | plus | |
Harvest21 | ABC32998 | 547 | 6e-22 | 282 - 341 | 97 | 58 / 60 | plus | |
Harvest21 | ABC32822 | 570 | 6e-22 | 367 - 426 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00815 | 2900 | 6e-22 | 1040 - 1099 | 97 | 58 / 60 | plus | ABC00815 |
Harvest21 | ABC00799 | 681 | 6e-22 | 416 - 475 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00793 | 1091 | 6e-22 | 492 - 551 | 97 | 58 / 60 | plus | ABC00793 |
Harvest21 | ABC00791 | 631 | 6e-22 | 504 - 563 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00783 | 801 | 6e-22 | 416 - 475 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00763 | 763 | 6e-22 | 498 - 557 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00760 | 637 | 6e-22 | 402 - 461 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00757 | 605 | 6e-22 | 256 - 315 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00755 | 874 | 6e-22 | 679 - 738 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00582 | 689 | 6e-22 | 309 - 368 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00560 | 971 | 6e-22 | 401 - 460 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00543 | 1036 | 6e-22 | 432 - 491 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00529 | 804 | 6e-22 | 242 - 301 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00528 | 602 | 6e-22 | 253 - 312 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00524 | 874 | 6e-22 | 563 - 622 | 97 | 58 / 60 | plus | ABC00524 |
Harvest21 | ABC00508 | 596 | 6e-22 | 378 - 437 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00305 | 1030 | 6e-22 | 486 - 545 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00296 | 861 | 6e-22 | 393 - 452 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00292 | 684 | 6e-22 | 391 - 450 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00285 | 1008 | 6e-22 | 407 - 466 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00266 | 565 | 6e-22 | 356 - 415 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00264 | 895 | 6e-22 | 517 - 576 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00241 | 1119 | 6e-22 | 524 - 583 | 97 | 58 / 60 | plus | ABC00241 |
Harvest21 | ABC00240 | 798 | 6e-22 | 387 - 446 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00232 | 1132 | 6e-22 | 547 - 606 | 97 | 58 / 60 | plus | |
Harvest21 | ABC00214 | 698 | 6e-22 | 380 - 439 | 97 | 58 / 60 | plus | |
Harvest35 | U35_45111 | 512 | 3e-25 | 310 - 369 | 100 | 60 / 60 | plus | |
Harvest35 | U35_38457 | 730 | 3e-25 | 508 - 567 | 100 | 60 / 60 | plus | |
Harvest35 | U35_38360 | 692 | 3e-25 | 442 - 501 | 100 | 60 / 60 | plus | |
Harvest35 | U35_38357 | 678 | 3e-25 | 255 - 314 | 100 | 60 / 60 | plus | |
Harvest35 | U35_38176 | 632 | 3e-25 | 172 - 231 | 100 | 60 / 60 | plus | |
Harvest35 | U35_37280 | 660 | 3e-25 | 500 - 559 | 100 | 60 / 60 | plus | |
Harvest35 | U35_37216 | 522 | 3e-25 | 330 - 389 | 100 | 60 / 60 | plus | |
Harvest35 | U35_37214 | 551 | 3e-25 | 482 - 541 | 100 | 60 / 60 | plus | |
Harvest35 | U35_37159 | 508 | 3e-25 | 309 - 368 | 100 | 60 / 60 | plus | |
Harvest35 | U35_37143 | 541 | 3e-25 | 442 - 501 | 100 | 60 / 60 | plus | |
Harvest35 | U35_329 | 617 | 3e-25 | 485 - 544 | 100 | 60 / 60 | plus | |
Harvest35 | U35_318 | 977 | 3e-25 | 521 - 580 | 100 | 60 / 60 | plus | |
Harvest35 | U35_227 | 661 | 3e-25 | 466 - 525 | 100 | 60 / 60 | plus | |
Harvest35 | U35_207 | 905 | 3e-25 | 384 - 443 | 100 | 60 / 60 | plus | |
Harvest35 | U35_206 | 602 | 3e-25 | 341 - 400 | 100 | 60 / 60 | plus | |
Harvest35 | U35_203 | 583 | 3e-25 | 512 - 571 | 100 | 60 / 60 | plus | |
Harvest35 | U35_197 | 1206 | 3e-25 | 609 - 668 | 100 | 60 / 60 | plus | |
Harvest35 | U35_196 | 685 | 3e-25 | 420 - 479 | 100 | 60 / 60 | plus | |
Harvest35 | U35_109 | 630 | 3e-25 | 504 - 563 | 100 | 60 / 60 | plus | |
Harvest35 | U35_106 | 671 | 3e-25 | 470 - 529 | 100 | 60 / 60 | plus | |
Harvest35 | U35_88 | 720 | 3e-25 | 423 - 482 | 100 | 60 / 60 | plus | |
Harvest35 | U35_77 | 633 | 3e-25 | 489 - 548 | 100 | 60 / 60 | plus | |
Harvest35 | U35_68 | 955 | 3e-25 | 545 - 604 | 100 | 60 / 60 | plus | |
Harvest35 | U35_24 | 729 | 3e-25 | 386 - 445 | 100 | 60 / 60 | plus | |
Harvest35 | U35_45117 | 482 | 1e-23 | 426 - 482 | 100 | 57 / 57 | plus | |
Harvest35 | U35_37317 | 528 | 1e-23 | 472 - 528 | 100 | 57 / 57 | plus | |
Harvest35 | U35_29600 | 605 | 1e-23 | 393 - 452 | 98 | 59 / 60 | plus | |
Harvest35 | U35_302 | 1080 | 1e-23 | 829 - 888 | 98 | 59 / 60 | plus | |
Harvest35 | U35_211 | 984 | 1e-23 | 389 - 448 | 98 | 59 / 60 | plus | |
Harvest35 | U35_204 | 706 | 1e-23 | 332 - 391 | 98 | 59 / 60 | plus | |
Harvest35 | U35_115 | 711 | 1e-23 | 366 - 425 | 98 | 59 / 60 | plus | |
Harvest35 | U35_82 | 1085 | 1e-23 | 488 - 547 | 98 | 59 / 60 | plus | |
Harvest35 | U35_23 | 634 | 1e-23 | 398 - 457 | 98 | 59 / 60 | plus | |
Harvest35 | U35_8 | 678 | 1e-23 | 468 - 527 | 98 | 59 / 60 | plus | |
Harvest35 | U35_50562 | 637 | 6e-22 | 462 - 521 | 97 | 58 / 60 | plus | |
Harvest35 | U35_45205 | 571 | 6e-22 | 219 - 278 | 97 | 58 / 60 | plus | |
Harvest35 | U35_38500 | 661 | 6e-22 | 511 - 570 | 97 | 58 / 60 | plus | |
Harvest35 | U35_38169 | 608 | 6e-22 | 407 - 466 | 97 | 58 / 60 | plus | |
Harvest35 | U35_37256 | 547 | 6e-22 | 282 - 341 | 97 | 58 / 60 | plus | |
Harvest35 | U35_37155 | 570 | 6e-22 | 367 - 426 | 97 | 58 / 60 | plus | |
Harvest35 | U35_342 | 1417 | 6e-22 | 832 - 891 | 97 | 58 / 60 | plus | |
Harvest35 | U35_337 | 2900 | 6e-22 | 1040 - 1099 | 97 | 58 / 60 | plus | |
Harvest35 | U35_314 | 1235 | 6e-22 | 727 - 786 | 97 | 58 / 60 | plus | |
Harvest35 | U35_305 | 637 | 6e-22 | 402 - 461 | 97 | 58 / 60 | plus | |
Harvest35 | U35_303 | 605 | 6e-22 | 256 - 315 | 97 | 58 / 60 | plus | |
Harvest35 | U35_226 | 691 | 6e-22 | 309 - 368 | 97 | 58 / 60 | plus | |
Harvest35 | U35_202 | 652 | 6e-22 | 242 - 301 | 97 | 58 / 60 | plus | |
Harvest35 | U35_198 | 598 | 6e-22 | 378 - 437 | 97 | 58 / 60 | plus | |
Harvest35 | U35_114 | 974 | 6e-22 | 391 - 450 | 97 | 58 / 60 | plus | |
Harvest35 | U35_110 | 633 | 6e-22 | 506 - 565 | 97 | 58 / 60 | plus | |
Harvest35 | U35_90 | 565 | 6e-22 | 356 - 415 | 97 | 58 / 60 | plus | |
Harvest35 | U35_79 | 1120 | 6e-22 | 524 - 583 | 97 | 58 / 60 | plus | |
Harvest35 | U35_78 | 488 | 6e-22 | 387 - 446 | 97 | 58 / 60 | plus | |
Harvest35 | U35_75 | 1141 | 6e-22 | 544 - 603 | 97 | 58 / 60 | plus | |
Harvest35 | U35_7 | 828 | 6e-22 | 564 - 623 | 97 | 58 / 60 | plus |
Contig Sequence (617 bp)
>U35_329 617 Hv_44K_v2 CAGAACCAAGCAACACTAGTTAATACCAATCCATCATGAAGACCTTCCTCATCTTTGCAC TCCTCGCCATTGTGGCAACAAGTACCATTGCACAACAACAACCATACCCACAACAACCAC AACCATTTCCACAACAACCCATCCCACAACAACCACAACCATACCCACAACAACCACAAC CATTTCCACAACAACCCATCCCACAACAACCACAACCATACCCACAACAACCACAACCAT TTCCACAACAACCCTTCCCATCACAACAACCATTTCCACAACAACCACCATTTTGGCAAC AACAACCAGTTCTATCGCAGCAACAACCATGTACACAAGACCAAACACCACTCCTACAAG AACAACAAGATCAAATGCTTCTGCAAGTACAAATACCATTTGTTCATCCATCTATTTTGC AGCAGCTAAACCCATGCAAGGTATTCCTCCAGCAGCAGTGCAGCCCTGTGGCAATGTCAC AACGTATTGCAAGGTCGCAAATGTTGCAACAGAGCAGTTGCCATGTGTTGCAGCAACAAT GTTGCCAACAACTGCCGCAAATCCCCGAACAAATCCGCCATGAGGCAGTCCGTGCAATCG TCTACTCTATCGTCCTG
Homology of Contig U35_329 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |