barSeed - Barley Seed Development Database

Probe ABC45569

Source Contig ABC45569

barSeed

Links

Affymetrix Source Sequence (644 bp)

>ABC45569 644
AGCATGTTATATTCATTCATTGAAAAGAGAGAACGAGAGGGTGAGAGTGAAGATTTATTT
CAGTTTTATTCTTCAATGATGATAATACATAGTCCAGCTTCTCCCTTTTGCAGTACTACA
CACTCATTTACACATGTTTGATGTTTCCATCCAGTGACACGCAAGAGCACACAAGAAAGC
GCTCACCCAATCAAACAACACAAGTCTATCTTGTAGGTTTCTCATGTGATGATGGCAGCG
CCTCTCCTGTATTCGCTAATAGTTCAGTCGCATGTGTAGGAGGAGAAGGCTTAACACGCC
GTCTGCAGCGACTCTAGCGCCCATGGATCCGGCTACCTGCTCATCTGAGGCGGCAATGGC
AAGAGCATATTGTGCAGAGGAAGAGGATGAGAAGAAACTTTTGGTTCTCATCTAATCTTT
GTGGAACTCTTTTTATGTGCGGTTGTGTATTTGTTGGGTCCTTTTTCTGTGCACTTGCAC
TTGCAGAAGTATCCTGTTATGTACATATAAAATTATTTTGATGTGCCCTTGTTAGGCGTT
GAACCTTAATGCGTGGAGTCGGTGGATGATGTATTGTATTTGATGTGATATGCTACTGAA
ATGAAATATATATTTTATTTGCATCTTTAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_45327.1	1306	0.0	124 - 474	100	351 / 351	None	ABC45569
MLOC_60435.3	3624	4e-151	1985 - 2333	94	331 / 351	CUST_1414_PI390587928	ABC14922 ABC29684 ABC45569
MLOC_60434.1	2568	4e-151	1084 - 1432	94	331 / 351	CUST_1414_PI390587928	ABC14922 ABC29684 ABC45569
MLOC_60435.5	2013	1e-150	383 - 730	94	330 / 350	CUST_1414_PI390587928	ABC29684 ABC45569
MLOC_60435.1	2053	1e-150	493 - 840	94	330 / 350	CUST_1414_PI390587928	ABC29684 ABC45569
MLOC_60435.2	3031	1e-150	1393 - 1740	94	330 / 350	CUST_1414_PI390587928	ABC29684 ABC45569
MLOC_60435.6	2917	1e-150	1277 - 1624	94	330 / 350	CUST_1414_PI390587928	ABC29684 ABC45569
AK250595.1	856	8e-118	582 - 856	95	260 / 275	CUST_2493_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK249247.1	750	4e-111	460 - 747	92	269 / 293	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC11624 ABC11625 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC37734 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK374695	634	4e-111	359 - 634	93	257 / 276	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928 CUST_30308_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC07851 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC17513 ABC19962 ABC21351 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK365264	1315	6e-109	1043 - 1313	93	252 / 271	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK250016.1	2853	8e-103	2579 - 2853	91	251 / 275	None	ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC30943 ABC34978 ABC34989 ABC38349 ABC44562 ABC44948 ABC45569
MLOC_28160.1	929	4e-101	448 - 726	91	253 / 279	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_60076.1	511	2e-99	1 - 245	93	229 / 245	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_30440.1	361	2e-98	92 - 360	91	252 / 278	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK359738	1264	1e-96	992 - 1264	90	246 / 273	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_3105_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK362032	681	1e-96	411 - 681	90	245 / 271	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK370037	1546	4e-96	1293 - 1546	92	234 / 255	CUST_6031_PI390587928	ABC01494 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC09292 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK366452	692	4e-96	427 - 692	91	241 / 266	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK252837.1	2740	2e-94	2479 - 2740	90	245 / 271	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05377 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
MLOC_64313.1	278	2e-94	1 - 263	90	249 / 276	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
AK372031	1366	2e-83	1069 - 1308	90	216 / 240	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC44562 ABC45569 ABC46334 ABC49963
MLOC_60435.7	2169	5e-75	1341 - 1538	92	183 / 198	None	ABC29684 ABC45569
MLOC_7526.1	208	2e-68	4 - 208	90	184 / 205	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC45569 ABC46334
MLOC_7574.1	193	2e-63	2 - 188	90	169 / 187	CUST_2502_PI390587928	ABC05171 ABC12988 ABC13209 ABC19962 ABC30081 ABC30943 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569
AK375595	2870	9e-63	500 - 700	89	179 / 202	CUST_12185_PI390587928	ABC04046 ABC04049 ABC04051 ABC04052 ABC04053 ABC14922 ABC45569
MLOC_29252.1	240	2e-58	72 - 240	91	154 / 169	None	ABC45569
AK250846.1	2265	1e-55	2124 - 2265	94	134 / 142	CUST_2110_PI390587928 CUST_8718_PI390587928 CUST_2499_PI390587928	ABC01497 ABC05171 ABC07805 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC50849
MLOC_81791.1	171	1e-55	5 - 171	90	151 / 167	CUST_30308_PI390587928	ABC01497 ABC05171 ABC05174 ABC05304 ABC06188 ABC12127 ABC12988 ABC13209 ABC13836 ABC19962 ABC21351 ABC24067 ABC30081 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC44948 ABC45569