barSeed - Barley Seed Development Database

Probe ABC34978

Source Contig ABC34978

barSeed

Links

Affymetrix Source Sequence (423 bp)

>ABC34978 423
CATCTTTAATAAACAAAAAAATGAAAAATTTAGATGAGTAAGAAAACAACTTTTTACTAT
TTTATCATTGGTTATCGTGCGTGCAATTTTACTAGTTTCCTTGGTCTGAAAGCCTTACCA
TCATTTTCTTCTTGCAGGCGGCCATGGCAAGAGCATATTGTGCAGAGGACGTGGATGAGA
AGAAACTTATGGTTCTCATTCAATCTTTGTGGAACTCTCTTTATGTGCGATTGTGCATTT
GTTGGAACCTTTTTTCTGTGCACTTGCACAAGTATTCTGTTGTGCACATGTAAAATTATT
TTGATGTGTCCTTGTTAGGTGTTGAACCTTAATGCGTGGAGTCAGTGGATGATGTATTGT
ATTTGATGTGATATGCTATTGAAATGAAATATACATTTTATTTGCAAAAAAAAAAAAAAA
AGG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_30440.1	361	4e-144	6 - 355	93	330 / 354	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_28160.1	929	9e-141	340 - 721	91	347 / 383	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_33574.1	258	7e-132	1 - 258	99	257 / 258	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC46334 ABC49963
AK359738	1264	2e-131	891 - 1264	90	335 / 374	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_3105_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK250016.1	2853	2e-121	2528 - 2853	91	297 / 326	None	ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC30943 ABC34978 ABC34989 ABC38349 ABC44562 ABC44948 ABC45569
AK252837.1	2740	7e-112	2479 - 2740	94	251 / 266	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05377 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
MLOC_64313.1	278	3e-105	1 - 278	91	261 / 286	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
AK249247.1	750	2e-102	456 - 747	90	264 / 293	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC11624 ABC11625 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC37734 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK374695	634	7e-102	359 - 634	91	252 / 276	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928 CUST_30308_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC07851 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC17513 ABC19962 ABC21351 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK250595.1	856	2e-98	581 - 856	91	251 / 277	CUST_2493_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK365264	1315	2e-97	1043 - 1313	91	246 / 271	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
MLOC_60076.1	511	3e-95	1 - 261	91	239 / 262	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK362032	681	2e-92	411 - 678	90	242 / 269	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK366452	692	3e-91	427 - 692	90	240 / 267	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK372031	1366	2e-82	1072 - 1312	90	218 / 242	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC44562 ABC45569 ABC46334 ABC49963
MLOC_80074.1	263	7e-72	4 - 204	91	183 / 201	None	ABC19962 ABC34978 ABC34989 ABC44562
MLOC_2874.2	1593	4e-69	1391 - 1586	91	179 / 197	CUST_2527_PI390587928	ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC16799 ABC19962 ABC30081 ABC33341 ABC34978 ABC38349 ABC44562 ABC44566 ABC49963
AK252392.1	1995	3e-66	1760 - 1971	89	188 / 212	None	ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC34978 ABC44948
MLOC_7526.1	208	3e-66	9 - 208	90	181 / 201	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC45569 ABC46334
MLOC_61318.1	383	4e-64	188 - 383	90	177 / 197	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12989 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC46334 ABC49963
MLOC_78323.1	239	6e-63	54 - 239	90	168 / 186	None	ABC19962 ABC34978 ABC34989 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_35304.3	1560	2e-62	2 - 185	90	167 / 185	None	ABC05172 ABC13209 ABC19962 ABC30081 ABC34978 ABC34989 ABC43152 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_35304.4	1555	2e-62	2 - 185	90	167 / 185	None	ABC05172 ABC13209 ABC19962 ABC30081 ABC34978 ABC34989 ABC43152 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_1753.1	3578	1e-60	3308 - 3487	90	164 / 182	CUST_15698_PI390587928 CUST_8718_PI390587928 CUST_20789_PI390587928 CUST_18870_PI390587928	ABC05172 ABC12127 ABC12128 ABC30081 ABC34978 ABC34989 ABC44562 ABC46334 ABC49963
AK250846.1	2265	1e-55	2124 - 2265	94	134 / 142	CUST_2110_PI390587928 CUST_8718_PI390587928 CUST_2499_PI390587928	ABC01497 ABC05171 ABC07805 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC50849
MLOC_591.1	166	1e-55	1 - 166	90	150 / 166	None	ABC19962 ABC34978 ABC34989 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_3407.1	361	4e-54	214 - 361	93	137 / 148	None	ABC19962 ABC34978 ABC34989 ABC44562 ABC44566
MLOC_81791.1	171	3e-51	5 - 171	89	149 / 167	CUST_30308_PI390587928	ABC01497 ABC05171 ABC05174 ABC05304 ABC06188 ABC12127 ABC12988 ABC13209 ABC13836 ABC19962 ABC21351 ABC24067 ABC30081 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC44948 ABC45569
MLOC_58288.1	152	1e-50	1 - 130	95	123 / 130	CUST_8721_PI390587928	ABC01497 ABC06188 ABC12128 ABC12988 ABC13209 ABC16799 ABC34978 ABC34989 ABC38349 ABC43152 ABC46334
MLOC_669.1	946	1e-50	806 - 944	93	129 / 139	None	ABC34978 ABC34989 ABC44562 ABC44566 ABC46334 ABC49963