barSeed - Barley Seed Development Database

Probe ABC05171

Source Contig ABC05171

barSeed

Links

Affymetrix Source Sequence (858 bp)

>ABC05171 858
GCTACATGGAGGAGGGCGGTGCGCCCTACGACTGCTACCAGCGCTACGCCGCGCTGCGCC
CCTTCGTCCGCCGCTTTGTGCCTCCGGCCTACCGCCTCTTCATAATCGGATGCGGCTCCG
CGCTTATGTCAGATGATATCGTCGCTTATGGCTACAATGTATCCTTAAATATTTTAATTT
CCCTCTTTGTTCGGGAAGTGAAATCTAGTGTCTCTTGAGTTCCTTATGAGCTGTAGACAT
GCAAACGGATGTTAGGGATATGGGTAAATTCTTTGATGAATCATTTGATTGTGCCCCCGT
CCCGCTCGCACAGTTCAACGACACCCAGCTCCTCTCCGATTACAACTTGCTGGAGGAGAC
GAGCCTAGTGAGGGAGTTGGCCCACAGGCTGCTCGGCGACTTCGGCGGCAACTTTGGCCG
GAACTTCGAGGGATGCTCGGGTGCCAAGCTGCCGCCGTCGCTCGTCGCCCTCTGCAAGGC
CGCGGAGCGCTGAAGCGTCCGGCTCTTCTTCCTCCCCCGCGGCATGACCAGGAGGGCGCA
GAACCGCTCATGGCACGACAACAGGTGGCAATGGCAAGAGCATATTGTGCAGAGGAAGAG
GATGAGAAGAAACTTGTGGTTCTCATCCAATCTTTGTGGAACTCTCTTTATGTGCGACTG
TGCATTTGTTGGGTCCTTTTTCTGTGCACTTGCACTTGTAGAAGTATCCTGTTGTGTACA
TGTAAAATTATTTTGATGTGCCCTTGTTAGGCGTTGAACCTTAATGCGTGGAATCGGTGA
ATGATGTATTTTATTTGATGTGATATGCTACTGAAATGAAATATACAATTTATTTGCAAT
CAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK250595.1	856	3e-58	235 - 361	99	126 / 127	CUST_2493_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
MLOC_1379.6	4187	9e-59	279 - 408	98	128 / 130	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_1379.3	4109	9e-59	279 - 408	98	128 / 130	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_1379.2	4030	9e-59	279 - 408	98	128 / 130	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_1379.5	3198	1e-77	279 - 436	100	158 / 158	CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC16978 ABC30081 ABC30943
MLOC_1379.7	3455	9e-59	257 - 386	98	128 / 130	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_26064.1	1042	5e-136	711 - 1042	93	309 / 332	CUST_8720_PI390587928	ABC05171
AK249247.1	750	3e-118	461 - 747	93	270 / 289	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC11624 ABC11625 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC37734 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_1379.1	4383	9e-59	385 - 514	98	128 / 130	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_1379.4	2883	9e-59	279 - 408	98	128 / 130	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC30081 ABC30943
AK365264	1315	5e-111	1045 - 1313	94	252 / 269	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK374695	634	5e-111	359 - 634	93	257 / 276	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928 CUST_30308_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC07851 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC17513 ABC19962 ABC21351 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_28160.1	929	1e-107	449 - 723	92	254 / 275	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK375567	2414	1e-106	393 - 662	93	250 / 270	CUST_13908_PI390587928	ABC05171 ABC30943
AK250016.1	2853	7e-105	2578 - 2853	92	253 / 276	None	ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC30943 ABC34978 ABC34989 ABC38349 ABC44562 ABC44948 ABC45569
AK362032	681	7e-105	411 - 680	92	249 / 270	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_30440.1	361	9e-104	91 - 357	92	254 / 276	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK252837.1	2740	3e-103	2478 - 2740	92	251 / 272	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05377 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
AK366452	692	1e-102	427 - 692	92	245 / 266	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_64313.1	278	1e-101	1 - 264	92	254 / 277	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
MLOC_60076.1	511	1e-101	1 - 246	94	231 / 246	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK359738	1264	2e-100	997 - 1264	91	245 / 268	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_3105_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK370037	1546	2e-99	1293 - 1546	93	236 / 255	CUST_6031_PI390587928	ABC01494 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC09292 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK372031	1366	7e-90	1069 - 1308	92	220 / 240	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC44562 ABC45569 ABC46334 ABC49963
MLOC_26063.1	1367	1e-86	711 - 923	94	200 / 213	CUST_8720_PI390587928	ABC05171 ABC30943
MLOC_78516.10	2600	5e-86	132 - 367	91	216 / 237	CUST_18503_PI390587928	ABC05171 ABC05172 ABC05174 ABC30943
MLOC_78516.3	2753	3e-83	305 - 532	91	209 / 229	CUST_18503_PI390587928 CUST_26893_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_78516.1	2520	3e-83	308 - 535	91	209 / 229	CUST_18503_PI390587928 CUST_26893_PI390587928	ABC05171 ABC05172 ABC05174 ABC30943
MLOC_78516.2	2407	1e-82	196 - 422	91	208 / 228	CUST_18503_PI390587928	ABC05171 ABC05172 ABC05174 ABC30943
MLOC_78516.4	2640	1e-82	193 - 419	91	208 / 228	CUST_18503_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_78516.5	1091	4e-82	303 - 528	91	207 / 227	CUST_26893_PI390587928	ABC05171 ABC05172 ABC30943
MLOC_78516.6	1345	4e-82	303 - 528	91	207 / 227	CUST_26893_PI390587928	ABC05171 ABC05172 ABC30081 ABC30943
MLOC_78516.8	721	2e-81	188 - 412	91	206 / 226	None	ABC05171 ABC05172 ABC30943
MLOC_78516.9	1222	2e-81	188 - 412	91	206 / 226	None	ABC05171 ABC05172 ABC30081 ABC30943
MLOC_30439.1	269	1e-77	76 - 269	94	182 / 194	None	ABC05171 ABC30943
MLOC_61318.1	383	4e-77	185 - 383	93	185 / 199	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12989 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC46334 ABC49963
AK252392.1	1995	2e-76	1763 - 1972	91	192 / 210	None	ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC34978 ABC44948
MLOC_78516.7	513	2e-76	168 - 448	86	242 / 282	None	ABC05171 ABC30943
MLOC_30852.1	368	3e-73	106 - 368	86	226 / 263	None	ABC01494 ABC05171 ABC05172 ABC05174 ABC12127 ABC17513 ABC21351 ABC21924 ABC24067 ABC30081 ABC44566 ABC44948
MLOC_26064.2	930	4e-72	744 - 930	93	174 / 187	CUST_8720_PI390587928	ABC05171
MLOC_7526.1	208	4e-72	7 - 208	91	184 / 202	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC45569 ABC46334
MLOC_7574.1	193	7e-65	3 - 185	91	167 / 183	CUST_2502_PI390587928	ABC05171 ABC12988 ABC13209 ABC19962 ABC30081 ABC30943 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569
MLOC_33574.1	258	9e-64	74 - 258	91	173 / 191	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_81791.1	171	4e-62	5 - 171	93	155 / 167	CUST_30308_PI390587928	ABC01497 ABC05171 ABC05174 ABC05304 ABC06188 ABC12127 ABC12988 ABC13209 ABC13836 ABC19962 ABC21351 ABC24067 ABC30081 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC44948 ABC45569
MLOC_2874.1	319	2e-55	184 - 319	96	130 / 136	None	ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC16799 ABC30081 ABC33341
MLOC_2874.2	1593	2e-55	1458 - 1593	96	130 / 136	CUST_2527_PI390587928	ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC16799 ABC19962 ABC30081 ABC33341 ABC34978 ABC38349 ABC44562 ABC44566 ABC49963
MLOC_1047.1	146	3e-53	3 - 143	94	132 / 141	None	ABC05171 ABC05172 ABC05174 ABC13209 ABC30081 ABC44566
AK250846.1	2265	4e-52	2124 - 2265	93	132 / 142	CUST_2110_PI390587928 CUST_8718_PI390587928 CUST_2499_PI390587928	ABC01497 ABC05171 ABC07805 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC50849
MLOC_78194.1	127	4e-52	1 - 127	96	122 / 127	None	ABC05171 ABC05174 ABC12127 ABC12128 ABC13836 ABC16799 ABC30081 ABC33341 ABC38349
MLOC_29432.2	239	2e-51	1 - 132	95	125 / 132	None	ABC05171
MLOC_29781.1	258	6e-51	1 - 149	91	136 / 149	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC06188 ABC12128 ABC12988 ABC13209 ABC16799 ABC33341 ABC34989 ABC38349 ABC44562 ABC46334