barSeed - Barley Seed Development Database

Probe ABC19962

Source Contig ABC19962

barSeed

Links

Affymetrix Source Sequence (747 bp)

>ABC19962 747
GATTACTAGGAAAATCCCTGAAGGAATCGGCCCCCTTTCTCCAGGAGGTACATATCTAGT
GCTGGGCAGGCTTTTTTTAGCAATTGAAACTTCTAATTTTAACCTCTACACTTGTGAAGC
CTATTTCCAGTGGTCATCCTACAATGAGCCTGAAAAACAACCGCACATATCATGACTCCA
AGATGATATATCCTGACCTGGACGTTGCATAAGAAAAAGGAAATGTAACCACCTTTTTTT
CTTAGCTTATGAGAGAAGACAGTTATAGTAGTAGCATTCAGGTTTCATTACTGTGCATTC
AAAAAAAGCAGTCACAAGCACATGACGACCCTACATCATATTTCCACCATTTTCTAAGTA
AGAAAAAAAATTTCTACTGTTTTATCATTGGTTATCGTCGGTGCAATTTTACTAGTTTCC
TTGGTCTGAAAGCCTTACCATCATTTTCTTCTTGCGCGCGGTAATGGCAAGAGCATATTG
TGCAGACGAAGAGGATGAGAAGAAACTTGTGGTTCTCATCCAATCTTCATGGAACTCTCT
TTATGTGTGTTTGTGCACTTGTTGGGTCCTTTTTTGGTGCGCTTGCACTTGTAGAAGTAT
TCTCTTGTGCACATGTAAAATTATTTTGATGTGCCCTTGTTAGACATTGAAACTTAATGC
ATGGAGTTGGTGGATGATGTATTGTATTTGATGTGATATGCTATTGAAATGAAATATACA
TTTTATTTGCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK359738	1264	0.0	652 - 1264	100	613 / 613	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_3105_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK359286	717	9e-178	345 - 716	97	361 / 372	None	ABC19962
MLOC_30389.1	324	9e-168	2 - 324	99	322 / 323	CUST_3105_PI390587928	ABC19962
MLOC_3407.1	361	5e-160	4 - 361	95	341 / 358	None	ABC19962 ABC34978 ABC34989 ABC44562 ABC44566
MLOC_79854.1	293	7e-139	2 - 293	97	284 / 292	None	ABC19962
MLOC_28160.1	929	6e-135	350 - 721	90	335 / 372	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_68181.1	264	2e-119	1 - 264	96	254 / 264	None	ABC19962
AK250016.1	2853	4e-116	2522 - 2853	89	298 / 333	None	ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC30943 ABC34978 ABC34989 ABC38349 ABC44562 ABC44948 ABC45569
MLOC_30440.1	361	2e-114	1 - 355	88	320 / 364	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_80074.1	263	7e-114	1 - 262	95	249 / 262	None	ABC19962 ABC34978 ABC34989 ABC44562
AK249247.1	750	3e-108	460 - 747	91	263 / 288	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC11624 ABC11625 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC37734 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK374695	634	3e-108	361 - 634	93	254 / 274	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928 CUST_30308_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC07851 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC17513 ABC19962 ABC21351 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_29087.1	234	2e-104	2 - 234	96	225 / 234	None	ABC19962
AK250595.1	856	2e-100	589 - 856	91	245 / 268	CUST_2493_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK365264	1315	8e-99	1043 - 1313	91	246 / 271	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK362032	681	8e-94	411 - 678	90	241 / 268	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_35922.1	212	8e-94	1 - 212	96	204 / 212	None	ABC19962
AK366452	692	1e-92	427 - 692	90	239 / 266	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_60076.1	511	1e-91	1 - 261	90	235 / 261	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_63344.11	2553	5e-91	603 - 822	95	208 / 220	None	ABC19962
MLOC_63344.2	3174	5e-91	1979 - 2198	95	208 / 220	None	ABC19962
MLOC_63344.8	1411	5e-91	761 - 980	95	208 / 220	None	ABC19962
MLOC_63345.2	1474	5e-91	595 - 814	95	208 / 220	None	ABC19962
MLOC_63344.6	1573	5e-91	783 - 1002	95	208 / 220	None	ABC19962
MLOC_63344.7	1570	5e-91	697 - 916	95	208 / 220	None	ABC19962
MLOC_33574.1	258	8e-89	1 - 257	90	235 / 262	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC46334 ABC49963
AK370037	1546	1e-87	1293 - 1546	90	229 / 255	CUST_6031_PI390587928	ABC01494 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC09292 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_64313.1	278	1e-87	1 - 278	88	255 / 291	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
AK252837.1	2740	5e-86	2482 - 2740	89	238 / 268	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05377 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
MLOC_57381.1	186	5e-81	4 - 186	97	177 / 183	None	ABC19962
MLOC_7574.1	193	2e-79	2 - 183	96	175 / 182	CUST_2502_PI390587928	ABC05171 ABC12988 ABC13209 ABC19962 ABC30081 ABC30943 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569
MLOC_63344.9	891	4e-77	703 - 891	95	179 / 189	None	ABC19962
MLOC_2874.2	1593	1e-66	1399 - 1593	90	176 / 195	CUST_2527_PI390587928	ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC16799 ABC19962 ABC30081 ABC33341 ABC34978 ABC38349 ABC44562 ABC44566 ABC49963
MLOC_7526.1	208	5e-66	9 - 208	90	179 / 200	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC45569 ABC46334
AK252392.1	1995	8e-64	1761 - 1977	87	189 / 217	None	ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC34978 ABC44948
MLOC_34030.1	147	4e-62	2 - 147	97	141 / 146	None	ABC19962
MLOC_81791.1	171	2e-60	5 - 171	92	154 / 167	CUST_30308_PI390587928	ABC01497 ABC05171 ABC05174 ABC05304 ABC06188 ABC12127 ABC12988 ABC13209 ABC13836 ABC19962 ABC21351 ABC24067 ABC30081 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC44948 ABC45569
MLOC_78323.1	239	8e-59	64 - 239	90	159 / 176	None	ABC19962 ABC34978 ABC34989 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_35304.3	1560	1e-57	16 - 191	90	159 / 177	None	ABC05172 ABC13209 ABC19962 ABC30081 ABC34978 ABC34989 ABC43152 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_35304.4	1555	1e-57	16 - 191	90	159 / 177	None	ABC05172 ABC13209 ABC19962 ABC30081 ABC34978 ABC34989 ABC43152 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_29088.1	148	6e-55	26 - 148	98	121 / 123	None	ABC19962
MLOC_591.1	166	8e-54	6 - 162	91	143 / 157	None	ABC19962 ABC34978 ABC34989 ABC44562 ABC44566 ABC46334 ABC49963