barSeed - Barley Seed Development Database

Probe ABC12128

Source Contig ABC12128

barSeed

Links

Affymetrix Source Sequence (677 bp)

>ABC12128 677
GTACATACCACGTCACGTGGGCGGACGTGTATACCTTTTTTTGTAGCGCATAGAGCATAT
TCCTCAATTTAGCAAAAGGCACTTAGAAGTAAAAGTTGCATCTTCGTTGAGAACGAGAGT
ATGCTCAATTGAGGAGTACATTCTATATATTGCTTGAACCATGTATAGTACTGTAAAACA
ATCAGACAAATAGTATTCGATTGTCATCACACCTCTTTACAAACAAGCAAGGCAATCTAT
ACATGTTTTGAGTTAATAAAATACAGATCCATATACTTTTTCGTTAGCCATGATTGCTTT
CTTCGGATAGCTTTTAATATATATATTGTGCGTGCAATTTTACTAGTTTCTTTGGTCTGA
AAGCCTTACCATCATTTTCTTCTTATAGACGGCAATGGCAAGAGCATATTGTGCGGAGAA
AGAGGATGAGAAGAAACTTGTGGTTCTCATCCCATCTTTGTGGAACTCTCTTTTTGTGCG
ATTGTGCACTTGTTGGGTCCTTTTTCTGTGCACTTGCACTTGTAGAAGTATTCTGTTGTG
CACATGTAAAATTATGTTGATGTGCCCTTGTTAGGCGTTGAACCTTAATGCGTGGAGTCG
GTGGATGATGTAATGTATTTGATCTGATATGCTACTGAAATGAAATATATATTCTATTGC
AAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_2874.2	1593	0.0	1068 - 1593	100	526 / 526	CUST_2527_PI390587928	ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC16799 ABC19962 ABC30081 ABC33341 ABC34978 ABC38349 ABC44562 ABC44566 ABC49963
MLOC_27395.1	766	0.0	277 - 766	92	451 / 492	None	ABC05172 ABC12127 ABC12128 ABC30081 ABC49963
AK249247.1	750	2e-149	457 - 747	99	290 / 291	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC11624 ABC11625 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC37734 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_29834.1	1352	5e-140	14 - 358	93	321 / 346	None	ABC12127 ABC12128
MLOC_28160.1	929	2e-133	382 - 721	92	313 / 340	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK359738	1264	5e-120	935 - 1261	91	296 / 327	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_3105_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK250595.1	856	1e-110	586 - 844	95	245 / 259	CUST_2493_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK365264	1315	2e-109	1044 - 1312	93	251 / 269	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK374695	634	9e-108	362 - 631	93	251 / 270	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928 CUST_30308_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC07851 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC17513 ABC19962 ABC21351 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_30440.1	361	9e-108	19 - 355	88	304 / 346	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK362032	681	2e-103	411 - 678	92	247 / 268	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_60076.1	511	2e-103	1 - 261	93	242 / 261	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK366452	692	9e-103	427 - 689	92	243 / 263	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK370037	1546	4e-96	1293 - 1543	92	232 / 252	CUST_6031_PI390587928	ABC01494 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC09292 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_1753.1	3578	6e-65	3308 - 3487	92	166 / 181	CUST_15698_PI390587928 CUST_8718_PI390587928 CUST_20789_PI390587928 CUST_18870_PI390587928	ABC05172 ABC12127 ABC12128 ABC30081 ABC34978 ABC34989 ABC44562 ABC46334 ABC49963
AK372031	1366	2e-93	1069 - 1308	93	222 / 240	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC44562 ABC45569 ABC46334 ABC49963
AK252837.1	2740	9e-93	2479 - 2737	90	242 / 268	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05377 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
MLOC_64313.1	278	9e-93	1 - 278	89	258 / 291	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
MLOC_33574.1	258	1e-86	12 - 258	90	228 / 253	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_61318.1	383	7e-79	185 - 383	93	186 / 199	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12989 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC46334 ABC49963
MLOC_7526.1	208	3e-72	9 - 208	92	183 / 200	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC45569 ABC46334
MLOC_2874.1	319	9e-68	180 - 319	100	140 / 140	None	ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC16799 ABC30081 ABC33341
MLOC_1624.1	232	1e-66	1 - 230	87	200 / 230	None	ABC01497 ABC05172 ABC06188 ABC12128 ABC13360 ABC16799 ABC17513 ABC21924 ABC24067 ABC33341 ABC38349 ABC46334
MLOC_29781.1	258	4e-56	1 - 149	93	139 / 149	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC06188 ABC12128 ABC12988 ABC13209 ABC16799 ABC33341 ABC34989 ABC38349 ABC44562 ABC46334
MLOC_78194.1	127	2e-55	1 - 127	98	124 / 127	None	ABC05171 ABC05174 ABC12127 ABC12128 ABC13836 ABC16799 ABC30081 ABC33341 ABC38349
MLOC_60284.3	2864	3e-53	1 - 159	91	144 / 159	CUST_29256_PI390587928	ABC12128 ABC38349 ABC44948
MLOC_60284.2	2258	3e-53	1 - 159	91	144 / 159	CUST_29256_PI390587928	ABC05973 ABC12128 ABC38349 ABC44948
MLOC_60284.4	2757	3e-53	1 - 159	91	144 / 159	CUST_29256_PI390587928	ABC05973 ABC12128 ABC38349 ABC44948
MLOC_60284.6	1952	9e-53	1 - 158	91	143 / 158	CUST_29256_PI390587928	ABC12128 ABC38349 ABC44948
AK250846.1	2265	3e-52	2124 - 2262	94	130 / 139	CUST_2110_PI390587928 CUST_8718_PI390587928 CUST_2499_PI390587928	ABC01497 ABC05171 ABC07805 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC50849
MLOC_58288.1	152	4e-51	4 - 152	91	136 / 149	CUST_8721_PI390587928	ABC01497 ABC06188 ABC12128 ABC12988 ABC13209 ABC16799 ABC34978 ABC34989 ABC38349 ABC43152 ABC46334