barSeed - Barley Seed Development Database

Probe ABC07805

Source Contig ABC07805

barSeed

Links

Affymetrix Source Sequence (1425 bp)

>ABC07805 1425
CCGAAACCCTAGCAAGTCAGTGCAGCCGCCTCCATCTCTCCCGGTCATCCCAATCACCTC
GTCTGATCCCGATCCACACATTCCAGCCACCACCGTCCCCACTTCGGCGCCTCCTCGTTC
CACCTCGACGCCGGTGAGGCATCCGTCTTGGACCGCACACAATCGGGGTGGCGGCAGATC
TAGAGTGGCGGCACTCTATGACCGCCGGAGACCTTGGTGATCTACAACAACGCGCATCGG
CAGCTGCTCCCTAAACCATGGAGTGCGCTCGCAGCTGCTCACCAAGGCACGGCGTGCGGC
TCCCAGGCATCCGCACGCGGGGTATATGACTAACCATGCGACAGGGGGTGGTGCCTCACT
TGGCGACCGCGTGTGAAGGATCCTCACGACGGCGGCCTATTCCCTGCTCTTTTTTCTACT
CCTTGGTCAGATGTGGTTTTCAGGTGGTGGGCACCGGCAGCGAGTCACTCACCAGAGACG
GGGATCATCAAACCCCAGCATGCTCGCTGGAAACAGATCCATAGCAGCGCCGACGATCTC
AAGCAGGGTCGACTACATAGCAATGTGATCCAGGAGGGACTGAGGACAGCTCAACTCCTG
CATTTCATCGTGAATTCGTCAAATGCAGTCTTTAATTTACAGCAACATAGTTCACAATAT
GATCATGCTAACATGAACAAAGTCTGTAGCATACGCCTGCTGAATAGCGAGGAACATATA
ATTGTATATTGCTCAGTAATGACTGAGCAAAGCTAGAAATGCCAAAGGAAGTAGTTACTT
AGGCAACAAAAACTGATGGGCAGAATATTCATTTCACAGAGCGCAGTTTGGAATAAGACG
ACATGCGTTGGCATTGTTCTCCACTTCAGGACTCTGTAGTACGCCGACTCGTGCTTCTTT
TTCTTCTTTACAGCTAGGATATTGTAAGGCCGAAGGAAATATATCTCTACATCTGATCTT
ACTTGTCTTTGATCCAAAGCAGGATACATAGCTCATATATAGCAGTAGTAACAAGGAAGA
GCCCTGATTTCCACTGAGAAACTGATGTAACAACCTCCTTGTCTCCTCCCTAATGAGCCA
AACATGTTTGACATTGCAGCGCAGAATCTGATAACAGTCGCAAAAGCGCAGAATCTTATA
CATGTGAAAAAATATGTGATTATGCCGGTGTTTTAGTTCAGGTGGATGCCTTTGCCTTGT
TGCTTGGTAAATATGGCCATAATTATTTGCCCCCTCTAATTTTTTTTTCCTGGGTCCGCC
CCTGGCAATGTAAGTCTCTGTTTCCCTGACTTATGTTCCTTATTTAATTGATTCAAGTTC
ACCTACCTGGATGGTGTGGTTTGCATACAAAATAGTACATAGCTGATTTAATCATTCACG
TAGGATGGTGCAGGCGATTGTTGGGGACTCGGTGCTGACCTGGGC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK250846.1	2265	0.0	2 - 1398	99	1395 / 1398	CUST_2110_PI390587928 CUST_8718_PI390587928 CUST_2499_PI390587928	ABC01497 ABC05171 ABC07805 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC50849
AK356981	1885	0.0	3 - 552	98	540 / 550	None	ABC07805 ABC50849
MLOC_47149.2	566	0.0	1 - 566	98	555 / 566	None	ABC07805
MLOC_47149.1	1085	8e-161	757 - 1085	98	322 / 329	None	ABC07805
MLOC_77918.1	858	0.0	307 - 856	94	517 / 551	None	ABC07805
MLOC_77918.2	2846	0.0	22 - 571	94	517 / 551	None	ABC07805 ABC14564 ABC14565
MLOC_77918.3	2709	0.0	16 - 547	94	499 / 533	None	ABC07805 ABC14564 ABC14565
MLOC_77918.4	2413	6e-172	1 - 388	95	368 / 388	None	ABC07805 ABC14564 ABC14565
MLOC_77918.5	2452	1e-163	1 - 373	95	353 / 373	None	ABC07805 ABC14564 ABC14565
MLOC_42699.1	228	9e-116	1 - 227	100	227 / 227	None	ABC07805
MLOC_23502.1	434	2e-101	177 - 434	93	239 / 258	None	ABC07805