barSeed - Barley Seed Development Database

Probe ABC16799

Source Contig ABC16799

barSeed

Links

Affymetrix Source Sequence (790 bp)

>ABC16799 790
CGGCCATGCCCTGCGCGCAGCCAACTGCAGATCTCACCTAGCCCTGCATCGTCGATCCCT
CCATCCATATCCATCCCTCCCTGCCTCCAATGCCGTGGGATAAATTTTTAGTATGCTCGC
ACTCCAGGACGCCATGGAGGACGCAGCTCCACCACTACCCCGACGCTATCTAGGAGCATC
CCAGATTCGGTCCATCCAAGCTCCCCGCCGCCTTGGTCTCCGCGAGGGCTGGATCTTGGC
CATCGAAGAGGGAGGGATCGAAGAAGAAGATTGCTCTGCTCGGCTGCTGCTGTTGCGATG
ATTGGGATGGTGAAAGCAACCTGGTATTCTATCGTCAGCCAACTACATGAGTAACATTGA
TTATTTAGCTGACTACACAAGTAATTTACTTTTTCTCATCTTATGATGCTCGGAGCAATG
CTTGTGTGATGAAGCTTACTCGCGCAACCTATTCACATATGTACTGTAGCTGTTGAAGCA
AAAGTTATCTGCACAGACGGCAATGGCAAGAGCATATTGTGCGGAGAAAGAGGATGAGAA
GAAACTTGTGGTTCTCATCCCATCTTTGTGGAACTCTCTTTTTGTGCGATTGTGCACTTG
TTGGGTCCTTTTTCTGTGCACTTGCACTTGTAGAAGTATTCTGTTGTGCACATGTAAAAT
TATGTTGATGTGCCCTTGTTAGGCGTTGAACCTTAATGCGTGGAGTCGGTGGATGATGTA
ATGTATTTGATCTGATATGCTACTGAAATGAAATATATATTCTATTTGCAATCAAAAAAA
AAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_41698.1	498	0.0	140 - 498	100	359 / 359	None	ABC11624 ABC11625 ABC16799 ABC37734
AK249247.1	750	2e-160	78 - 391	99	312 / 314	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC11624 ABC11625 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC37734 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_41698.2	667	3e-163	75 - 386	100	312 / 312	CUST_40835_PI390587928	ABC11624 ABC11625 ABC16799 ABC37734 ABC44428
MLOC_41697.1	1465	3e-163	132 - 443	100	312 / 312	CUST_4385_PI390587928 CUST_40835_PI390587928	ABC11624 ABC11625 ABC16799 ABC33341 ABC37734 ABC44428
AK250595.1	856	4e-112	586 - 856	94	254 / 271	CUST_2493_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
MLOC_28160.1	929	4e-112	444 - 723	93	260 / 280	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK365264	1315	6e-110	1044 - 1313	93	252 / 270	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK374695	634	2e-109	362 - 634	93	254 / 273	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928 CUST_30308_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC07851 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC17513 ABC19962 ABC21351 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK362032	681	1e-106	411 - 680	93	250 / 270	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_2874.1	319	2e-105	109 - 319	99	210 / 211	None	ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC16799 ABC30081 ABC33341
AK366452	692	2e-104	427 - 692	92	246 / 266	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK359738	1264	2e-99	993 - 1264	91	247 / 272	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_3105_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
MLOC_60076.1	511	3e-98	1 - 246	93	229 / 246	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK370037	1546	1e-97	1293 - 1546	92	235 / 255	CUST_6031_PI390587928	ABC01494 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC09292 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_30440.1	361	6e-95	92 - 357	90	248 / 275	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK252837.1	2740	2e-94	2479 - 2740	90	245 / 271	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05377 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
AK372031	1366	3e-93	1069 - 1308	93	222 / 240	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC44562 ABC45569 ABC46334 ABC49963
MLOC_64313.1	278	2e-90	1 - 259	90	244 / 272	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
MLOC_46057.1	201	2e-80	21 - 201	97	175 / 181	CUST_15317_PI390587928	ABC16799 ABC33341
MLOC_3134.1	186	6e-80	1 - 183	96	176 / 183	CUST_15317_PI390587928	ABC16799
MLOC_61318.1	383	8e-79	185 - 383	93	186 / 199	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12989 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC46334 ABC49963
MLOC_7526.1	208	2e-75	7 - 208	92	186 / 202	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC45569 ABC46334
MLOC_739.1	166	8e-69	6 - 165	96	154 / 160	CUST_15317_PI390587928	ABC16799
MLOC_2874.2	1593	1e-67	1454 - 1593	100	140 / 140	CUST_2527_PI390587928	ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC16799 ABC19962 ABC30081 ABC33341 ABC34978 ABC38349 ABC44562 ABC44566 ABC49963
MLOC_1624.1	232	4e-67	1 - 231	87	201 / 231	None	ABC01497 ABC05172 ABC06188 ABC12128 ABC13360 ABC16799 ABC17513 ABC21924 ABC24067 ABC33341 ABC38349 ABC46334
MLOC_33574.1	258	9e-59	74 - 258	89	170 / 191	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_29781.1	258	5e-56	1 - 149	93	139 / 149	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC06188 ABC12128 ABC12988 ABC13209 ABC16799 ABC33341 ABC34989 ABC38349 ABC44562 ABC46334
MLOC_78194.1	127	2e-55	1 - 127	98	124 / 127	None	ABC05171 ABC05174 ABC12127 ABC12128 ABC13836 ABC16799 ABC30081 ABC33341 ABC38349
AK250846.1	2265	9e-54	2124 - 2265	94	133 / 142	CUST_2110_PI390587928 CUST_8718_PI390587928 CUST_2499_PI390587928	ABC01497 ABC05171 ABC07805 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC50849
MLOC_58288.1	152	5e-51	4 - 152	91	136 / 149	CUST_8721_PI390587928	ABC01497 ABC06188 ABC12128 ABC12988 ABC13209 ABC16799 ABC34978 ABC34989 ABC38349 ABC43152 ABC46334