barSeed - Barley Seed Development Database

Probe ABC21351

Source Contig ABC21351

barSeed

Links

Affymetrix Source Sequence (348 bp)

>ABC21351 348
AGATATGCTGATTCTAGTCTATAAAGAAACTTGCGACTCTATGGGTAGATCTAACACTGG
CAGCCCGTGATTCATAAATATTTCTAACAGTGGCACCTTTCACTTTGTAGCGTGCTTTGC
ACTTCTTGTCTTCTATTGTGCAGAGGAAGAGGATGAGAAGAAACTTGTGGTTCTCATCCA
ATCTTTGTGGAACTCTCTTTATGTGCGATTCTGCACTTGTTGGGTTCTTTTTCTGTGCAC
TTACACTTGCAGAAATATTCTGTTGTACACATGTAAAATTATTTTGATGTGCCCTTGTTA
GGCGTTGAACTTTAATGTGTGAGTCCGTGATGATGTATTGTATTTATG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK370037	1546	0.0	1160 - 1509	99	348 / 350	CUST_6031_PI390587928	ABC01494 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC09292 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_64718.10	2750	3e-99	2555 - 2750	100	196 / 196	CUST_6031_PI390587928	ABC09292 ABC21351
MLOC_64718.6	2364	3e-99	2169 - 2364	100	196 / 196	CUST_6031_PI390587928	ABC09292 ABC21351
MLOC_64718.7	1286	3e-99	1091 - 1286	100	196 / 196	CUST_6031_PI390587928	ABC09292 ABC21351
AK365264	1315	1e-83	1061 - 1278	93	202 / 218	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK250595.1	856	3e-80	602 - 819	92	200 / 218	CUST_2493_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK249247.1	750	3e-80	477 - 690	92	197 / 214	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC11624 ABC11625 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC37734 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_60076.1	511	1e-78	8 - 225	91	199 / 218	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK374695	634	2e-77	379 - 597	91	199 / 219	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928 CUST_30308_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC07851 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC17513 ABC19962 ABC21351 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK362032	681	2e-77	422 - 636	91	196 / 215	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK366452	692	2e-77	438 - 652	91	196 / 215	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
MLOC_64718.1	2247	6e-77	2092 - 2247	100	156 / 156	CUST_6031_PI390587928	ABC09292 ABC21351
MLOC_64718.12	1540	2e-76	1386 - 1540	100	155 / 155	None	ABC09292 ABC21351
MLOC_64718.4	1227	2e-76	1073 - 1227	100	155 / 155	CUST_6031_PI390587928	ABC09292 ABC21351
MLOC_28160.1	929	8e-76	465 - 679	91	195 / 215	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK372031	1366	2e-72	1084 - 1298	90	193 / 215	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC44562 ABC45569 ABC46334 ABC49963
MLOC_64718.5	1130	2e-72	983 - 1130	100	148 / 148	CUST_6031_PI390587928	ABC09292 ABC21351
MLOC_64718.2	2358	2e-72	2211 - 2358	100	148 / 148	CUST_6031_PI390587928	ABC09292 ABC21351
MLOC_64718.3	3436	2e-72	3289 - 3436	100	148 / 148	CUST_6031_PI390587928	ABC09292 ABC21351
AK250016.1	2853	1e-68	2599 - 2816	89	193 / 218	None	ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC30943 ABC34978 ABC34989 ABC38349 ABC44562 ABC44948 ABC45569
AK359738	1264	6e-67	1010 - 1227	88	192 / 218	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_3105_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
MLOC_61318.1	383	4e-64	200 - 383	91	167 / 184	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12989 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC46334 ABC49963
AK252392.1	1995	2e-62	1779 - 1962	90	166 / 184	None	ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC34978 ABC44948
MLOC_81791.1	171	2e-57	14 - 171	92	146 / 158	CUST_30308_PI390587928	ABC01497 ABC05171 ABC05174 ABC05304 ABC06188 ABC12127 ABC12988 ABC13209 ABC13836 ABC19962 ABC21351 ABC24067 ABC30081 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC44948 ABC45569
MLOC_30852.1	368	2e-57	110 - 329	85	188 / 220	None	ABC01494 ABC05171 ABC05172 ABC05174 ABC12127 ABC17513 ABC21351 ABC21924 ABC24067 ABC30081 ABC44566 ABC44948