- Probe ABC11625
- Source Contig ABC11625
Affymetrix Source Sequence (1054 bp)
>ABC11625 1054 CCCACGTCTCCTCTCTCGTCTCCCGCACCCTAGGTTAGCCGCCGCCGCCGCCGCTCACCT TATTCCGGCGAGATCCGGCGGCCATGCCCTGCGTGCAGCCAACTGCGGATCTCACCTAGC CCTGCATCGTCGATCCCTCCATCCATATCCATCTCTCCCCGCCTCCAATGCCATGGGATA AATTTTTAGTATGCTCGCACTGCAGGACGCCATGGAGGACGCAGCTCCACCACTACCCCG ACGCTATCCAGGAGCATCCCAGATTCGGTCCATCCAAGCTCCCCGCCGCCTTGGTCTCCG CGAGGGCTGGATCTTGGCCATCGATGAGGGAGGGATGGAAGAAGAAGATTGCTCTGCTCG GCTGCTGCTATTGCGATGATTGGGATGGTGGGTGAAGTGGTTGGTTTCAATACCATCTAC ATATGTTGCTTGCCGAGCACCTTCACAAAAGAGAATCTCATCCTGTATGCAGCTACTTTG TCCTACGGTGATAGACGAGTGTCATCAATAACCAAGCGTATGAAAGGCAAAACCATCATA CGATAGATTGTCAAATCCTGCATCCATCGTAGATGCATGAATGTTTCACTTTGTGTCAGA GCAGTAGAGCAGTAACCATGGAAATAGTTACCGGTTCAGCACCATTGAATAAAGATTTTG AGCAGTTTTAACATGACCCATCTAGCCCTCTTACCTGCTATTTTCACGTTATGAAACTTT TCGTGCTACCTTCCAGATGATAGATGTTCAATCTGCATTTCCGTGAAGCCTAGATGCTCG AAATACTGGAGTCTGGACTGGATTAGTTAATGCCAGTGTGTGCGTCACGCGTAAGGATAG AATAGTGCTGCACAAAAGTTGTTTATGATCCATCTAGTACTGCTGTACCGTTCCATAGTC ACCATCCGATTAGCATCACGTTTTGCTAGTGCTTCTATGGTAGATGTTCCAGAACATTTT TTTTCTCTCCAGAATAGGGTTGTATCATCTTCTCCTTGTTCTTCTGTTTTCTTGCCCCTC TTATGACTGGAAGTTCCAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_41697.1 | 1465 | 0.0 | 57 - 1081 | 95 | 982 / 1038 | CUST_4385_PI390587928 CUST_40835_PI390587928 | ABC11624 ABC11625 ABC16799 ABC33341 ABC37734 ABC44428 |
| MLOC_41698.2 | 667 | 0.0 | 2 - 667 | 94 | 637 / 677 | CUST_40835_PI390587928 | ABC11624 ABC11625 ABC16799 ABC37734 ABC44428 |
| MLOC_41698.1 | 498 | 5e-172 | 65 - 451 | 95 | 370 / 390 | None | ABC11624 ABC11625 ABC16799 ABC37734 |
| AK249247.1 | 750 | 3e-169 | 3 - 396 | 94 | 374 / 398 | None | ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC11624 ABC11625 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC37734 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 |
| MLOC_7434.1 | 2070 | 8e-100 | 910 - 1176 | 91 | 251 / 275 | CUST_1167_PI390587928 CUST_6561_PI390587928 CUST_40835_PI390587928 CUST_40036_PI390587928 | ABC11624 ABC11625 ABC15764 ABC44428 |
| MLOC_7434.2 | 1636 | 2e-85 | 1 - 232 | 91 | 219 / 240 | CUST_6561_PI390587928 CUST_40036_PI390587928 | ABC11624 ABC11625 ABC44428 |
| MLOC_7434.3 | 1006 | 3e-84 | 1 - 230 | 91 | 217 / 238 | CUST_6561_PI390587928 CUST_40036_PI390587928 | ABC11624 ABC11625 ABC44428 |
| AK369429 | 1162 | 5e-72 | 984 - 1162 | 94 | 169 / 179 | CUST_6561_PI390587928 CUST_40036_PI390587928 | ABC11624 ABC11625 ABC44428 |