barSeed - Barley Seed Development Database

Probe ABC30081

Source Contig ABC30081

barSeed

Links

Affymetrix Source Sequence (554 bp)

>ABC30081 554
GATGATGGTTGTAACCTGTAGTAAATTCCTTGGACAAAGACCAAATGTGTTAACAGACTA
CCTTGTATAATTTATCACACATATTAATTACAGTACTTATTTTATTTTATGGGTACATGA
GGCCACGATTAATGTTGGGTACTAGTTTACTAGTGGCGTAATTCTTATGTATTGATGGCA
GCAAGAATACTTATGTTAACAAGTCTTCACCCTGTGTGATGAATAGTTTCCTTGTTCTAA
AAGCCTTACCATCATTTTCTTCTTGCAGGTGGCAATGGCAAGAGCATATTGTGCAGAGGA
AGAGGATGAGAAGAAACTTGTGGTTCTCATCCAATCTTTGTGGAACTCTCTTTATGTGCG
ACTGTGCATTTGTTGGGTCCTTTTTCTGTGCACTTGCACTTGTAGAAGTATCCTGTTGTG
TACATGTAAAATTATTTTGATGTGCCCTTGTTAAGCGTTGAACCTTAATGCGTGGAATCG
GTGAATGATGTATTTTATTTGATGTGATATGCTACTGAAATGAAATATACAATTTATTTG
CAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_25777.1	1347	2e-172	1 - 328	100	328 / 328	None	ABC05172 ABC05174 ABC30081
AK250595.1	856	9e-142	581 - 856	99	275 / 276	CUST_2493_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
MLOC_1379.1	4383	1e-140	4082 - 4383	97	292 / 302	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_1379.7	3455	4e-140	3155 - 3455	97	291 / 301	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_1379.4	2883	5e-139	2585 - 2883	97	289 / 299	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC30081 ABC30943
MLOC_1379.3	4109	5e-139	3811 - 4109	97	289 / 299	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_1379.2	4030	5e-139	3732 - 4030	97	289 / 299	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_1379.5	3198	5e-139	2900 - 3198	97	289 / 299	CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC16978 ABC30081 ABC30943
MLOC_1379.6	4187	5e-139	3889 - 4187	97	289 / 299	CUST_2584_PI390587928 CUST_8720_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
AK250016.1	2853	9e-122	2536 - 2853	92	291 / 318	None	ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC30943 ABC34978 ABC34989 ABC38349 ABC44562 ABC44948 ABC45569
MLOC_28160.1	929	3e-121	402 - 721	91	292 / 320	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK249247.1	750	7e-118	461 - 744	94	266 / 284	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC11624 ABC11625 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC37734 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK359738	1264	9e-117	947 - 1264	91	288 / 318	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_3105_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
MLOC_30440.1	361	9e-112	42 - 355	90	291 / 323	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK365264	1315	2e-109	1045 - 1313	93	251 / 269	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK374695	634	2e-109	359 - 634	93	256 / 276	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928 CUST_30308_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC07851 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC17513 ABC19962 ABC21351 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_60076.1	511	2e-108	1 - 261	94	245 / 261	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_64313.1	278	7e-108	1 - 278	92	267 / 291	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
AK362032	681	3e-102	411 - 678	92	246 / 268	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK252837.1	2740	9e-102	2478 - 2740	92	250 / 272	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05377 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
AK366452	692	3e-101	427 - 692	92	244 / 266	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK370037	1546	7e-98	1293 - 1546	92	235 / 255	CUST_6031_PI390587928	ABC01494 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC09292 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK372031	1366	2e-88	1069 - 1308	91	219 / 240	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC44562 ABC45569 ABC46334 ABC49963
MLOC_33574.1	258	7e-83	32 - 256	91	211 / 231	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_30852.1	368	7e-83	61 - 368	85	262 / 308	None	ABC01494 ABC05171 ABC05172 ABC05174 ABC12127 ABC17513 ABC21351 ABC21924 ABC24067 ABC30081 ABC44566 ABC44948
MLOC_78516.6	1345	3e-82	1174 - 1345	99	170 / 172	CUST_26893_PI390587928	ABC05171 ABC05172 ABC30081 ABC30943
MLOC_78516.9	1222	2e-78	1058 - 1222	99	163 / 165	None	ABC05171 ABC05172 ABC30081 ABC30943
AK252392.1	1995	1e-76	1763 - 1972	91	192 / 210	None	ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC34978 ABC44948
MLOC_78516.3	2753	1e-76	2592 - 2753	99	160 / 162	CUST_18503_PI390587928 CUST_26893_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_78516.4	2640	1e-76	2479 - 2640	99	160 / 162	CUST_18503_PI390587928	ABC05171 ABC05172 ABC05174 ABC30081 ABC30943
MLOC_61318.1	383	1e-75	185 - 383	92	184 / 199	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12989 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC46334 ABC49963
MLOC_2874.2	1593	5e-70	1411 - 1593	93	170 / 183	CUST_2527_PI390587928	ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC16799 ABC19962 ABC30081 ABC33341 ABC34978 ABC38349 ABC44562 ABC44566 ABC49963
MLOC_35304.3	1560	5e-65	1 - 177	92	163 / 177	None	ABC05172 ABC13209 ABC19962 ABC30081 ABC34978 ABC34989 ABC43152 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_35304.4	1555	5e-65	1 - 177	92	163 / 177	None	ABC05172 ABC13209 ABC19962 ABC30081 ABC34978 ABC34989 ABC43152 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_1753.1	3578	3e-62	3316 - 3487	92	159 / 173	CUST_15698_PI390587928 CUST_8718_PI390587928 CUST_20789_PI390587928 CUST_18870_PI390587928	ABC05172 ABC12127 ABC12128 ABC30081 ABC34978 ABC34989 ABC44562 ABC46334 ABC49963
MLOC_81791.1	171	3e-62	5 - 171	93	155 / 167	CUST_30308_PI390587928	ABC01497 ABC05171 ABC05174 ABC05304 ABC06188 ABC12127 ABC12988 ABC13209 ABC13836 ABC19962 ABC21351 ABC24067 ABC30081 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC44948 ABC45569
MLOC_7574.1	193	3e-62	3 - 183	91	164 / 181	CUST_2502_PI390587928	ABC05171 ABC12988 ABC13209 ABC19962 ABC30081 ABC30943 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569
MLOC_27395.1	766	1e-60	607 - 766	93	149 / 160	None	ABC05172 ABC12127 ABC12128 ABC30081 ABC49963
MLOC_2874.1	319	1e-55	184 - 319	96	130 / 136	None	ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC16799 ABC30081 ABC33341
MLOC_1047.1	146	2e-53	3 - 143	94	132 / 141	None	ABC05171 ABC05172 ABC05174 ABC13209 ABC30081 ABC44566
MLOC_78194.1	127	3e-52	1 - 127	96	122 / 127	None	ABC05171 ABC05174 ABC12127 ABC12128 ABC13836 ABC16799 ABC30081 ABC33341 ABC38349