barSeed - Barley Seed Development Database

Probe ABC34989

Source Contig ABC34989

barSeed

Links

Affymetrix Source Sequence (481 bp)

>ABC34989 481
GTTTATGGTGTGTTTCCCTTGAAAAAAGTGCACGGTGGTTCTGGTCTGTGAGTAGTTTTC
CACTCCACTTCGTAAGTCATAACTAGATGAATGAGAAAACAATTTTCTACTGTTTTATCA
TTGGTTATCGTTCGTGCAATTTTACTAGTTTCCTTGGTCTGAAAGCCTTATCATCATTTT
CTTCTTGCAGGCGGCAATGGCAAGAGCATATTGTGCAGAGGAAGAGGATGAGAAGAAACT
TTGTGGTTCTCATCCAATCTTCGTGCAACTCTCTTTATGTGCGATTGTGCACTTTTTGGA
TCCTTTTTCTGTGGGCTTGCACTTGCAGAAGTATTATGTTGTGCACATGTAAAATTATTT
TGATGTGCCCTTGTTAGGCGTTGAACCTTAATGCATGGAGTCGGTGGATGATGTATTGTA
TTTGATGTGATATGCTACTGAAATGAAATATACATTTTATTTGCAAAAAAAAAAAAAAAA
A

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_28160.1	929	2e-163	329 - 721	93	367 / 394	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK359738	1264	1e-150	895 - 1264	93	344 / 371	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_3105_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK374695	634	2e-143	359 - 634	100	276 / 276	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928 CUST_30308_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC07851 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC17513 ABC19962 ABC21351 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK250016.1	2853	3e-131	2528 - 2853	93	303 / 327	None	ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC12127 ABC12989 ABC13209 ABC13836 ABC19962 ABC21351 ABC30081 ABC30943 ABC34978 ABC34989 ABC38349 ABC44562 ABC44948 ABC45569
MLOC_30440.1	361	4e-130	1 - 355	90	330 / 365	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK249247.1	750	5e-119	456 - 747	93	273 / 293	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC11624 ABC11625 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC37734 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK365264	1315	5e-114	1043 - 1313	94	256 / 272	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
AK250595.1	856	8e-112	581 - 856	93	258 / 277	CUST_2493_PI390587928	ABC01494 ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
MLOC_2713.2	1452	4e-110	1077 - 1452	86	337 / 390	None	ABC12988 ABC34989 ABC43152
MLOC_60076.1	511	2e-108	1 - 261	94	246 / 262	None	ABC01494 ABC01497 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
AK362032	681	2e-102	411 - 678	92	247 / 269	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK252837.1	2740	8e-102	2479 - 2740	92	250 / 272	CUST_2110_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05377 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
MLOC_64313.1	278	8e-102	1 - 278	90	264 / 292	CUST_8718_PI390587928 CUST_2502_PI390587928 CUST_4954_PI390587928 CUST_8724_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
AK366452	692	3e-101	427 - 692	92	245 / 267	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC46334 ABC49963
AK370037	1546	4e-100	1293 - 1546	93	237 / 256	CUST_6031_PI390587928	ABC01494 ABC05171 ABC05172 ABC05174 ABC05304 ABC06188 ABC09292 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC21924 ABC24067 ABC30081 ABC30943 ABC33341 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOC_33574.1	258	4e-100	1 - 258	92	243 / 264	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC46334 ABC49963
AK372031	1366	8e-87	1069 - 1308	91	219 / 241	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC06191 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC44562 ABC45569 ABC46334 ABC49963
AK249678.1	1547	8e-87	1248 - 1544	87	258 / 298	CUST_3243_PI390587928	ABC03677 ABC06191 ABC13360 ABC17513 ABC21924 ABC24067 ABC34989 ABC49897
AK371668	1529	3e-81	1269 - 1529	88	230 / 262	None	ABC05172 ABC06188 ABC13360 ABC17513 ABC21924 ABC24067 ABC34989 ABC46334
MLOC_81791.1	171	3e-81	5 - 171	99	166 / 167	CUST_30308_PI390587928	ABC01497 ABC05171 ABC05174 ABC05304 ABC06188 ABC12127 ABC12988 ABC13209 ABC13836 ABC19962 ABC21351 ABC24067 ABC30081 ABC34978 ABC34989 ABC38349 ABC44562 ABC44566 ABC44948 ABC45569
MLOC_30552.1	694	1e-80	508 - 694	96	179 / 187	None	ABC34989
MLOC_2713.1	924	2e-78	672 - 924	88	234 / 267	None	ABC12988 ABC34989 ABC43152
MLOC_80074.1	263	6e-78	1 - 200	93	187 / 201	None	ABC19962 ABC34978 ABC34989 ABC44562
MLOC_78323.1	239	6e-78	43 - 239	93	185 / 198	None	ABC19962 ABC34978 ABC34989 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_61318.1	383	2e-77	24 - 383	83	300 / 361	None	ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC06188 ABC12127 ABC12128 ABC12989 ABC13360 ABC13836 ABC16799 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC44562 ABC46334 ABC49963
MLOC_32051.1	212	3e-76	1 - 155	100	155 / 155	None	ABC34989
MLOC_7526.1	208	1e-74	9 - 208	92	184 / 200	CUST_8721_PI390587928 CUST_2528_PI390587928	ABC01497 ABC05171 ABC05172 ABC05174 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC45569 ABC46334
MLOC_7574.1	193	2e-68	1 - 183	92	169 / 183	CUST_2502_PI390587928	ABC05171 ABC12988 ABC13209 ABC19962 ABC30081 ABC30943 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569
MLOC_669.1	946	1e-64	795 - 946	96	146 / 152	None	ABC34978 ABC34989 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_35304.3	1560	2e-63	12 - 185	92	161 / 175	None	ABC05172 ABC13209 ABC19962 ABC30081 ABC34978 ABC34989 ABC43152 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_35304.4	1555	2e-63	12 - 185	92	161 / 175	None	ABC05172 ABC13209 ABC19962 ABC30081 ABC34978 ABC34989 ABC43152 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_1753.1	3578	2e-62	3308 - 3478	92	159 / 173	CUST_15698_PI390587928 CUST_8718_PI390587928 CUST_20789_PI390587928 CUST_18870_PI390587928	ABC05172 ABC12127 ABC12128 ABC30081 ABC34978 ABC34989 ABC44562 ABC46334 ABC49963
MLOC_591.1	166	2e-62	1 - 166	93	155 / 167	None	ABC19962 ABC34978 ABC34989 ABC44562 ABC44566 ABC46334 ABC49963
MLOC_3407.1	361	4e-60	218 - 361	96	138 / 144	None	ABC19962 ABC34978 ABC34989 ABC44562 ABC44566
AK250846.1	2265	2e-57	2124 - 2265	95	135 / 142	CUST_2110_PI390587928 CUST_8718_PI390587928 CUST_2499_PI390587928	ABC01497 ABC05171 ABC07805 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC50849
MLOC_76105.1	116	7e-53	1 - 116	99	115 / 116	None	ABC34989
MLOC_58288.1	152	7e-53	1 - 152	91	139 / 152	CUST_8721_PI390587928	ABC01497 ABC06188 ABC12128 ABC12988 ABC13209 ABC16799 ABC34978 ABC34989 ABC38349 ABC43152 ABC46334
MLOC_29781.1	258	3e-51	1 - 149	91	136 / 149	CUST_8721_PI390587928 CUST_8722_PI390587928	ABC01497 ABC05171 ABC06188 ABC12128 ABC12988 ABC13209 ABC16799 ABC33341 ABC34989 ABC38349 ABC44562 ABC46334