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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_8724_PI390587928Hv_44K_v2GAACCTTAATGCGTGGAGTCGGTGGATGATGTATTGTATTTGATGTAATATGCTACTGAA1000GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36526413153e-211234 - 12939758 / 60plus ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13836 ABC16799 ABC19962 ABC21351 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334 ABC49963
MLOCAK3746956343e-21553 - 6129758 / 60plus ABC01497 ABC05171 ABC05172 ABC05173 ABC05174 ABC05304 ABC06188 ABC07851 ABC12127 ABC12128 ABC12988 ABC12989 ABC13209 ABC13360 ABC13836 ABC16799 ABC17513 ABC19962 ABC21351 ABC24067 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC44948 ABC45569 ABC46334
MLOCMLOC_64313.12783e-2124 - 839758 / 60minus ABC01497 ABC05171 ABC05172 ABC05173 ABC06188 ABC12128 ABC12988 ABC12989 ABC13209 ABC16799 ABC19962 ABC30081 ABC30943 ABC33341 ABC34978 ABC34989 ABC38349 ABC43152 ABC44562 ABC44566 ABC45569 ABC49963
JLOC1JLOC1_1797.12278e-25161 - 22010060 / 60plus
Harvest21ABC1298810433e-25945 - 100410060 / 60plusABC12988
Harvest21ABC455696451e-2345 - 1049859 / 60minusABC45569
Harvest21ABC431524561e-2343 - 1029859 / 60minusABC43152
Harvest21ABC1298910881e-23991 - 10509859 / 60plusABC12989
Harvest21ABC448035286e-2239 - 989758 / 60minus
Harvest21ABC349894816e-2240 - 999758 / 60minusABC34989
Harvest21ABC1320912756e-221177 - 12369758 / 60plusABC13209
Harvest21ABC014979006e-22823 - 8829758 / 60plusABC01497
Harvest21ABC503545478e-211 - 559854 / 55minus
Harvest35U35_1430010993e-251001 - 106010060 / 60plus
Harvest35U35_460386451e-2345 - 1049859 / 60minus
Harvest35U35_449044561e-2343 - 1029859 / 60minus
Harvest35U35_1429510321e-23935 - 9949859 / 60plus
Harvest35U35_389834816e-2240 - 999758 / 60minus
Harvest35U35_1902312916e-221193 - 12529758 / 60plus
Harvest35U35_1430913006e-221203 - 12629758 / 60plus
Harvest35U35_1430812696e-221167 - 12239856 / 57plus
Harvest35U35_485165478e-211 - 559854 / 55minus



Contig Sequence (1099 bp)

>U35_14300 1099 Hv_44K_v2
CTCCCCTCCCACCTCTCCCGTCGCCAGCCTTCCTTCCCCTCAGCAGACCCCCTGTGCTCC
CGTCCGCCGCGACAGACCCGTGCGCTCCCTTCTCCACCTCTCTCGTCAACCTGGATCTGT
CCTCCCATCGTCTCCACCAAAGCCAAGCAAAGCAGAGGAACAGGAATCCCGGTTGAAGGA
TGACACAGGCGGCGCGGCCGAGGGCGAGAACGAGCAGGGGGCACCCGCATCTTCGGGCCC
TCCGGGAAGTATTCCTCCCGTGACCTTGCCGCCCACACCTCCCTCAAGCCCAGGCACGAT
CCCCTGTGCCCCAAGGAGAACGGCGACAAGGTGGCGGCAGTAGTCACCATGGAAGAAGTC
GCAAGAAGATCTACCACCTCGTCTCCATTCCGGGATCTGTCGCCCGCGCCGCCGCCTCCC
TGCCCTCTTTGCCGTTGCCGTCGTCCATTGCCGCAGACGCCTCCTCCTCACTGGCGAGAT
GGTACGACCTCCCCTTACTCCTATCTATGACGGCTCTAATCCGTGCTCCTCCGGATGCCA
AGTTTCATCTTTCGCCACCTCCTGCCACTCATGGCGACCGCCGCGTCGCCCCCTCACCCA
CCACGCCCGGGACCCCATGGCGGCCCGTGTCCTGGTCCCCATGGCTACCGGCCTTTTCCC
CTCGCCCCCATGGCCGGCATCCCCATGGCGGCTGCTGCTGTGTACGTTGAAAAGGGTGCT
AAAGTAGACCTTCCATTTTGGCTTGCGCATGGAATGCTGTCTCTGGAACAAGCGGTGTCA
ATAAATGTACCTCATTGCTTCACCCAGAAGCGGCAATGGCAAGAGCATATTGTGAAGAGG
AAGAGGATGAGAAGAAACGTGTGGTTCTCATTCAATCTTTGTGGAACTCTCTTTATGTGT
GATTGTGCATTTGTTGGAACCTTTCTCTGTGCACTTGCACTTGCAGCAGTATTCTGTTGT
GCACATGTAAAATTATTTTGATGTGCCCTTGTTAGGCGTTGAACCTTAATGCGTGGAGTC
GGTGGATGATGTATTGTATTTGATGTAATATGCTACTGAAATGAAATATATATTTTATTT
GCAAAAAAAAAAAAAAAAA



Homology of Contig U35_14300 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None