barSeed - Barley Seed Development Database

Probe ABC01094

Source Contig ABC01094

barSeed

Links

Affymetrix Source Sequence (973 bp)

>ABC01094 973
GCAAGCGATCCCCGGAAAGTTTCCGATCGAATCGAAGCCAAGGCTTTCTCCTCCCCTCCG
AGATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTTGAGTCCT
CTGACACGATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACC
GGCAGCGCCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCTGACTACA
ACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTCAGGGGTGGTATGCAGATCT
TCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCTTCGGACACCATCG
ACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCA
TCTTTGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTTGCTGACTACAACATCCAGAAGG
AGTCCACCCTGCACCTGGTGCTCCGCCTCAGGGGTGGTATGCAGATCTTCGTTAAGACCC
TCACTGGCAAGACCATCACCCTGGAGGTTGAGTCATCTGACACCATCGACAATGTGAAGG
CAAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAGCAGCGCCTCATCTTTGCTGGTA
AGCAGCTTGAGGATGGCCGCACTCTGGCGGACTACAACATCCAGAAGGAGTCGACCCTCC
ACTTGGTGCTCCGCCTCCGTGGTGGCCTGTAAGTGCTTGGCCATGGAGCTGCTTATGTCT
CTGGGCTCACAATTTAGCTGTCTTTGAATTATCGGCGTGTCCGTCATCTGGTCTAGCGTT
ATGTTCTTCGTTGCTACTGTGTTGTGGTCTAGCGTTATGTTTGGTTGTGTCCCATGAATT
TCTGTGGTGCAGCAGATTTGGATGAACTGTGGAATGAATGAATAAGTGAGCCCTAAAAAA
AAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248348.1	1407	1e-82	258 - 484	91	207 / 227	CUST_5215_PI390587928 CUST_5200_PI390587928	ABC01035 ABC01036 ABC01038 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01058 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC39599 ABC49693 ABC50770
AK372915	1481	2e-80	1005 - 1233	90	207 / 229	CUST_5216_PI390587928 CUST_34700_PI390587928	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC49011 ABC49693 ABC50770
AK375488	1613	6e-81	102 - 328	91	206 / 227	CUST_329_PI415269222 CUST_5200_PI390587928	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC24558 ABC39287 ABC39599 ABC43994 ABC49693 ABC50770
AK360597	1495	1e-82	983 - 1209	91	207 / 227	CUST_11183_PI390587928 CUST_34710_PI390587928 CUST_14537_PI390587928 CUST_34621_PI390587928	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01058 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC24558 ABC39287 ABC39599 ABC40971 ABC49011 ABC49693 ABC50770
AK248213.1	1169	4e-78	55 - 282	90	205 / 228	None	ABC01035 ABC01036 ABC01037 ABC01038 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01058 ABC01072 ABC01078 ABC01079 ABC01082 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC24558 ABC39287 ABC39599 ABC40971 ABC49693 ABC50770
AK371303	1634	2e-81	1233 - 1460	91	207 / 228	CUST_14531_PI390587928 CUST_18646_PI390587928 CUST_23509_PI390587928	ABC01030 ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC49011 ABC49693 ABC50770
AK360704	1727	6e-76	1224 - 1438	91	195 / 215	CUST_34666_PI390587928 CUST_14502_PI390587928 CUST_15758_PI390587928	ABC01030 ABC01035 ABC01036 ABC01038 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01058 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC24558 ABC39287 ABC39599 ABC40971 ABC49693 ABC50770
AK357004	1103	2e-81	502 - 729	91	207 / 228	CUST_23509_PI390587928 CUST_18646_PI390587928 CUST_34489_PI390587928 CUST_14531_PI390587928	ABC01030 ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC49011 ABC49693 ABC50770
AK372493	1722	2e-161	112 - 567	89	407 / 456	CUST_5216_PI390587928	ABC01030 ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01058 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC24558 ABC39287 ABC39599 ABC40413 ABC49693 ABC50770
AK354759	1306	8e-80	789 - 1016	90	206 / 228	CUST_5216_PI390587928 CUST_5233_PI390587928	ABC01030 ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01058 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC24558 ABC39287 ABC39599 ABC49693 ABC50770
AK252178.1	1017	4e-73	595 - 822	89	202 / 228	CUST_5216_PI390587928 CUST_4457_PI390587928 CUST_14536_PI390587928	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01068 ABC01072 ABC01078 ABC01079 ABC01086 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC40573 ABC49011 ABC49693 ABC50770
AK249379.1	803	4e-73	366 - 593	89	202 / 228	CUST_5216_PI390587928 CUST_4457_PI390587928 CUST_14536_PI390587928	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01068 ABC01072 ABC01078 ABC01079 ABC01086 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC40573 ABC49011 ABC49693 ABC50770
AK357664	735	2e-85	100 - 328	92	210 / 229	CUST_24042_PI390587928 CUST_40121_PI390587928	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01072 ABC01078 ABC01079 ABC01087 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC49011 ABC49693 ABC50770
AK252410.1	727	3e-84	90 - 310	92	204 / 221	None	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01072 ABC01078 ABC01079 ABC01087 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC31758 ABC32001 ABC36919 ABC39287 ABC49693 ABC50770
AK360864	759	3e-79	102 - 331	90	207 / 230	CUST_24042_PI390587928	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01072 ABC01078 ABC01079 ABC01087 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC49693 ABC50770