barSeed - Barley Seed Development Database

Probe ABC01082

Source Contig ABC01082

barSeed

Links

Affymetrix Source Sequence (610 bp)

>ABC01082 610
CCGTGGTGGCCAGTAAGTGCCTGGCAATGGAGCTGCTTCTCTCCTGGTTCACAGTTCTTG
TGTCTTCCTGTTGTCCAACAGGGGTGTCTGTCTCGTCCTGGTCGTTTCTATGTTTCCACC
GTACTGTGATGCATCGGCTGTATCTGAAAACTTCTGCCTTTGTGAAGCAGCTTCTGTGAA
CTATGATAAATAAGTTTTCTGGTACTGATTTTTGTTGCGGTACAACACAGCTTGTGGCAC
CTTTTCTCACATTATTCATGTGAATATTGTACCTTTGGCTGTTATGTCTGCATCATCTGG
TGTAACTGGTTATTCTTCACCTTGGGATCAAATTGGCTATTGGGGGCTTTTCAATGTGAG
ATGGAAGTAATATTAACCATGTCCTTTTGGTCGTGTGTTTGATTCTACCATGATGTAATC
CAGTGCTATGTTAGCAACTTTGATGAACTATCATGAACAAGGAATACAAATCCAGTGCTA
TGTTAGCAACTTTGATGAACTATCATGAACAAGGACTGTGTTCGGTGTTCTGTCCAAGAT
TCTATTGTTTTCACCAGATGTTCATTGCTACGTTATTCTGATGTTATTTGTTTAAAAAAA
AAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_19096.1	792	0.0	276 - 677	100	402 / 402	CUST_5171_PI390587928 CUST_15787_PI390587928	ABC01037 ABC01082
MLOC_19095.1	304	6e-159	1 - 304	100	304 / 304	None	ABC01037 ABC01082
AK248213.1	1169	2e-98	957 - 1151	100	195 / 195	None	ABC01035 ABC01036 ABC01037 ABC01038 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01058 ABC01072 ABC01078 ABC01079 ABC01082 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC24558 ABC39287 ABC39599 ABC40971 ABC49693 ABC50770