barSeed - Barley Seed Development Database

Probe ABC40413

Source Contig ABC40413

barSeed

Links

Affymetrix Source Sequence (338 bp)

>ABC40413 338
CAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATCTTCGCCGGCAA
GCAGTTGGAGGAAGATCGCACCCTTGCGGACTACAACATCCAGAAGGAGTCCACCCTTCA
CCTGGTGCTCCGCCTCAAAAAGGTCAGTAATTGCCGTGTGTCGTCCGGTGGGTGTGCCTC
TTTGTTCAAGTGTCGTCTCGTCTGAGTGAAGTCGTACTGTGTCTGGTTTGATGGATCATC
GAGTCATCCTTATGTGTGGTTTTGTGCAAACAGTTTCTGGTACATCTGTGCCGTTAAGTA
TGAATAAGTCAAATTTGAAGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK372915	1481	1e-54	1089 - 1244	92	143 / 156	CUST_5216_PI390587928 CUST_34700_PI390587928	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC49011 ABC49693 ABC50770
AK372493	1722	1e-54	1335 - 1588	82	211 / 256	CUST_5216_PI390587928	ABC01030 ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01058 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC24558 ABC39287 ABC39599 ABC40413 ABC49693 ABC50770
AK371303	1634	2e-52	1316 - 1451	94	128 / 136	CUST_18646_PI390587928 CUST_23509_PI390587928 CUST_14531_PI390587928	ABC01030 ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC49011 ABC49693 ABC50770
AK357004	1103	2e-52	585 - 720	94	128 / 136	CUST_23509_PI390587928 CUST_14531_PI390587928 CUST_34489_PI390587928 CUST_18646_PI390587928	ABC01030 ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC49011 ABC49693 ABC50770
AK252178.1	1017	2e-51	678 - 833	90	141 / 156	CUST_14536_PI390587928 CUST_5216_PI390587928 CUST_4457_PI390587928	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01068 ABC01072 ABC01078 ABC01079 ABC01086 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC40573 ABC49011 ABC49693 ABC50770
AK249379.1	803	2e-51	449 - 604	90	141 / 156	CUST_4457_PI390587928 CUST_14536_PI390587928 CUST_5216_PI390587928	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01068 ABC01072 ABC01078 ABC01079 ABC01086 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC40573 ABC49011 ABC49693 ABC50770