barSeed - Barley Seed Development Database

Probe ABC32001

Source Contig ABC32001

barSeed

Links

Affymetrix Source Sequence (498 bp)

>ABC32001 498
TTTGCTCTGCTCTTTTACCTACCTACCAATCGAGAACCGAACTCATTTAGATGTGTCCCG
TTTGTCTTTTAAGCTGAAACCTTGGAGTATTATGTTTCCTGAATATTTCATCGCCTACTC
CTGTAATGCGATGCGTGCTTAAATTTTGGTGTCCGTATGCTTTTTAAAAAAAAAAAAAAA
AAAAAAAAAAAAAANCCCCTGCAGGAGGCCGCCGAGGCCTACCTCGTCGGCCTCTTCGAG
GACACCAACCTTTGCGCCATCCACGCGAAGCGCGTCACCATCATGCCCAAGGACATCCAG
CTCGCCCGCCGCATCCGCGGGGAGCGTGCCTAGGTTTTCGGTCGCCGCCGGTGACAGCAC
TGGGTAGTAGCCGCTCGTGTATGGTGGTCTGGTTCTTCTGTTGGTGGTGTTGATATTATG
TGTCGTTCGGTCCATTGTAGCCCGATTCTGGAATGAACTTGCAATGGAAAGTTATTCATT
CAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_36762.6	691	3e-106	483 - 691	100	209 / 209	CUST_671_PI390587928	ABC32001
MLOC_17268.1	552	1e-79	22 - 182	100	161 / 161	CUST_13151_PI390587928	ABC01038 ABC31758 ABC32001 ABC36919
AK252410.1	727	3e-76	572 - 726	100	155 / 155	None	ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01072 ABC01078 ABC01079 ABC01087 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC31758 ABC32001 ABC36919 ABC39287 ABC49693 ABC50770
AK356852	632	4e-70	343 - 624	84	243 / 288	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK251714.1	648	3e-66	363 - 635	84	234 / 279	CUST_664_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK358538	636	1e-64	339 - 490	96	146 / 152	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
MLOC_38052.1	1142	2e-63	999 - 1142	97	140 / 144	CUST_12372_PI390587928 CUST_672_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00657 ABC00660 ABC00669 ABC00676 ABC00684 ABC00701 ABC32001 ABC47839
MLOC_38052.2	420	2e-63	277 - 420	97	140 / 144	CUST_672_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00657 ABC00660 ABC00669 ABC00676 ABC00684 ABC00701 ABC32001 ABC47839
AK373609	639	4e-60	344 - 481	97	134 / 138	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
MLOC_51390.1	1968	5e-59	1710 - 1968	83	221 / 265	CUST_667_PI390587928	ABC00041 ABC00106 ABC00135 ABC00186 ABC00660 ABC00684 ABC32001 ABC47839
MLOC_51390.2	672	5e-59	414 - 672	83	221 / 265	CUST_667_PI390587928	ABC00041 ABC00106 ABC00135 ABC00186 ABC00660 ABC00684 ABC32001 ABC47839
AK374251	641	9e-57	354 - 491	96	132 / 138	CUST_1695_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK376784	636	1e-55	352 - 491	95	133 / 140	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK251519.1	663	1e-55	365 - 497	96	128 / 133	CUST_1667_PI390587928 CUST_1721_PI390587928 CUST_1642_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK357111	1705	4e-55	1389 - 1526	95	131 / 138	CUST_10042_PI390587928 CUST_1668_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00179 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC12246 ABC14926 ABC31599 ABC32001 ABC32138 ABC47839
AK249451.1	741	4e-55	351 - 488	95	131 / 138	CUST_1724_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
MLOC_21186.1	412	1e-54	212 - 348	95	130 / 137	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC47839 ABC48883
AK355128	762	5e-54	362 - 497	95	129 / 136	CUST_1725_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC36955 ABC47839
AK375327	649	2e-53	342 - 479	94	130 / 138	CUST_1696_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00179 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00405 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
MLOC_18282.1	712	2e-53	154 - 291	94	130 / 138	CUST_1668_PI390587928 CUST_10042_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK374129	658	2e-52	351 - 483	95	126 / 133	CUST_1675_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK370674	671	2e-52	352 - 484	95	126 / 133	CUST_1701_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
MLOC_16460.1	855	9e-52	643 - 777	94	127 / 135	CUST_665_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839