barSeed - Barley Seed Development Database

Probe ABC00136

Source Contig ABC00136

barSeed

Links

Affymetrix Source Sequence (853 bp)

>ABC00136 853
TTTGGGGTCGGCACGACTCAACAGCCGCTCTCCGAGTCTCCTGAAAGCTGCAACCTCCCC
CTCTCGGCGAATTTGGGGTTTCCGAAGCGCGCGAGGTGAACCAAAGTTTTGATCATGGCT
CGTACTAAGCAGACTGCTCGTAAGTCCACTGGAGGGAAGGCTCCAAGGAAGCAGCTAGCC
ACCAAGGCTGCCCGCAAGTCTGCTCCCACAACTGGAGGAGTGAAGAAGCCTCACCGTTAC
CGCCCTGGAACTGTTGCTCTTCGTGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTC
ATAAGGAAGCTTCCATTCCAGAGGCTTGTCAGGGAGATTGCCCAGGACTTCAAGACTGAC
CTCCGCTTCCAGAGCCATGCGGTGCTTGCCCTTCAGGAGGCTGCAGAGGCCTACCTGGTG
GGTCTCTTCGAGGACACCAACCTGTGCGCCATCCATGCCAAGCGTGTGACCATCATGCCC
AAGGACATTCAGCTGGCTAGGAGGATCCGTGGCGAGAGGGCTTAAGCTGCTTTGCCTGTG
GGAATGGCTCTGGTGGGCATAGCTCCGTGTGTCTGCTTTTGCTGCTGAACACTTATCATG
TGTCGTGAACTACTAATACTAGTTGTCTGTAGTAATATGTCAGTACTGTACTCTGTCGTA
CTATGTTCTAGAGCTGGATCATTTGTTCGTTGGTCGTCCTGAAGCGTCCACATGGTGGGT
TCTTATCTGAACCTTGCATTTTATGTTCGAAAATTAGTGATTGCGTGAACTGTTATTATG
TGCCTGTGTCATGTTTTATTTGTATCTCTGTGATGCAAGTTTGAATTTGGGGGAGCAAAA
AAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK356372	811	0.0	20 - 811	97	773 / 794	None	ABC00014 ABC00040 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00186 ABC00196 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00660 ABC00676 ABC00684 ABC00701 ABC00971 ABC26233 ABC31599 ABC47839
AK250389.1	805	0.0	8 - 784	98	761 / 777	None	ABC00014 ABC00040 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00186 ABC00196 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00660 ABC00676 ABC00684 ABC00701 ABC00971 ABC26233 ABC31599 ABC47839
MLOC_2584.1	444	0.0	11 - 444	100	434 / 434	None	ABC00014 ABC00040 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00186 ABC00196 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00660 ABC00676 ABC00684 ABC00701 ABC00971 ABC31599 ABC47839
AK375440	790	7e-100	82 - 495	83	342 / 414	CUST_9528_PI390587928 CUST_1700_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32138 ABC47839
AK364394	3569	3e-98	1003 - 1416	82	341 / 414	CUST_9380_PI390587928 CUST_9528_PI390587928 CUST_1700_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC02587 ABC10055 ABC19867 ABC31599 ABC32138 ABC47839
AK353900	651	1e-96	74 - 490	82	345 / 420	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00179 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32138 ABC47839
AK356852	632	5e-96	69 - 448	83	317 / 380	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK374129	658	9e-94	72 - 489	82	342 / 419	CUST_1675_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK374251	641	1e-92	80 - 459	83	318 / 383	CUST_1695_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK361398	726	5e-91	99 - 480	83	318 / 385	CUST_666_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32138 ABC47839 ABC49742
AK373609	639	5e-91	70 - 449	83	315 / 381	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK251519.1	663	7e-90	86 - 499	81	339 / 417	CUST_1667_PI390587928 CUST_1642_PI390587928 CUST_1721_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK355128	762	2e-89	88 - 467	82	313 / 380	CUST_1725_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC36955 ABC47839
AK376784	636	1e-87	73 - 452	82	315 / 383	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK370674	671	1e-86	73 - 486	81	334 / 414	CUST_1701_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK358538	636	5e-86	65 - 444	82	314 / 383	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK251714.1	648	2e-84	84 - 463	82	313 / 383	CUST_664_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
MLOC_77754.1	491	1e-77	334 - 491	100	158 / 158	CUST_1643_PI390587928 CUST_1694_PI390587928	ABC00126 ABC00136
MLOC_39545.1	682	1e-77	327 - 676	82	286 / 350	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32138 ABC47839
MLOC_32599.1	1179	5e-71	1 - 338	81	275 / 339	CUST_1699_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32138 ABC47839
MLOC_81511.1	380	3e-63	237 - 380	97	140 / 144	None	ABC00126 ABC00136
MLOC_34920.1	383	9e-59	230 - 383	94	144 / 154	CUST_1694_PI390587928	ABC00126 ABC00136