barSeed - Barley Seed Development Database

Probe ABC00179

Source Contig ABC00179

barSeed

Links

Affymetrix Source Sequence (474 bp)

>ABC00179 474
GGTGGGGCTTCTTTACGCCGCCGGTGGCCGGGGCGGACTTGCGGGCGGCCTTGGTGGCCA
GTTGCTTCCTCGGCGCCTTGCCACCGGTGGACTTCCTCGCCGTCTGCTTGGTGCGGGCCA
TGTCGCCGGTGCGCGGGGAGGTCCGGCCCGGCCCCCGGCCCCGTCAAGGCCCGCCACGAG
GACACGCAATCATGCACGCACCGGGCCTCTTTCGGACGAGCTGTCCGTCTTTGCGCGCCA
CCGCATTTTGTGCTGTCTGTATTTTTTTCTAACTGGCCGGACGGGCCGGCCTCTCCTGTG
TAGCCCCGCTCACGCGCGTTCGTTCGCCTCGGATTCTTTCTTTCTTGCCCCCCTCCCTGT
ACCGCCAAATTGATGAGATTTGATTTATATTTTTATTTATCATTACTCCCCTTCATTGTA
TTATGCCATCCTTGTTTAATCATAGATCTGTCTCTTTCATAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_68309.2	1480	4e-169	1015 - 1339	99	324 / 325	CUST_35046_PI390587928 CUST_1637_PI390587928	ABC00179 ABC00609
AK360797	1122	2e-167	796 - 1121	99	324 / 326	CUST_35046_PI390587928 CUST_1637_PI390587928	ABC00179 ABC00609
MLOC_68309.1	674	7e-147	390 - 674	99	284 / 285	CUST_35046_PI390587928	ABC00179 ABC00609
AK357111	1705	6e-68	1093 - 1235	99	142 / 143	CUST_10042_PI390587928 CUST_1668_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00179 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC12246 ABC14926 ABC31599 ABC32001 ABC32138 ABC47839
AK376214	661	1e-60	40 - 181	96	137 / 142	CUST_1696_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00179 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00405 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC29964 ABC31599 ABC32138 ABC47839
AK375327	649	7e-53	46 - 188	93	133 / 143	CUST_1696_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00179 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00405 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
AK353900	651	3e-51	71 - 195	96	120 / 125	None	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00126 ABC00130 ABC00135 ABC00136 ABC00141 ABC00176 ABC00179 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32138 ABC47839