barSeed - Barley Seed Development Database

Probe ABC12246

Source Contig ABC12246

barSeed

Links

Affymetrix Source Sequence (914 bp)

>ABC12246 914
CGCCGCGCAGCCGCCGCAGCGAGGTTTTAGGGGTAAGCAGAGAGGACTCCCGGCGGCGGC
GCGAGGCGGAGAGATGTCGAAGCGAACTGGTCCCCCGAAGCACCAGAACAGCTACGCATG
GAAGCCCAACCTCGGCCGGAAGATCAACGAGACCGAGCCCGGGGGCAGGTTCCGGCCTCT
GTCGGAGATCACCGGCGTCTGCCAGCGCTGCCGGGACCAAATCGACTGGAAGCGCAAATA
CGGCAAGTACAAGCCGATTGTCGAGCCTGCAAAATGCCAGAAGTGCAGTAAACGAAACGT
CCGGCAGGCGTACCACAACGTCTGTACAGGTTGCTCCAAGGAGCTTGGGATTTGTGCCAA
GTGCTGCACCTCTGTTAAGCAGCTTGTTGGAAGGGATGCTGAGGAAGAAGACAGTGAGCG
CAAAGCACTAGAGGAGGCCATCAGATATGCTAGGGAGAGGGAGCGAAGGACACTGATTCG
CCTTATGAACAAAAATAAGGATGAGGAGAGCGGGCCATCAGTTCCAAAGATCGCGGACCG
AGATCGGGAAGGCGACCTTTTCCCTGTTGCATCTCTTGACGAATATGCTGAACAGGCTGT
ACAGAAGGATGAGTCTGATGAAGAAGATGCCAGGGATTTTGTGAAAGATTAAGTTTGCAA
GGTCTGGTACTGTAAAAGGATATTTAGTTTTGTGCGCGGACGATTCTAACTCGCTGGAGA
AATGCCAATACTTGTTTTGGCAGAGATATATGTTTCTGTTTATCAGACTTATTTTGACTA
GTGAGCTTGCGGCACCTTCCCAGTTATGCTAAGCTTCTTTTCCTAATAAGTATAGGATTA
TGAAGCTGTATTATTACATGAGTGGTATATACTGCTGTTGCTGGTTGCATCTTGTTNAAA
AAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK357594	748	0.0	2 - 748	100	747 / 747	None	ABC12246 ABC14926
MLOC_13701.1	705	0.0	1 - 705	99	704 / 705	None	ABC12246
MLOC_81139.1	445	3e-143	1 - 330	95	313 / 331	None	ABC12246 ABC14926
MLOC_41284.2	274	1e-87	1 - 203	96	194 / 203	None	ABC12246 ABC14926
MLOC_41284.1	200	3e-84	1 - 200	95	190 / 200	None	ABC12246 ABC14926
MLOC_40399.1	455	6e-81	1 - 203	94	190 / 203	None	ABC12246 ABC14926
AK361389	1416	1e-72	349 - 509	98	157 / 161	None	ABC12246 ABC14926 ABC25340
AK357111	1705	1e-72	349 - 509	98	157 / 161	CUST_10042_PI390587928 CUST_1668_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00179 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC12246 ABC14926 ABC31599 ABC32001 ABC32138 ABC47839
AK369051	4094	1e-68	236 - 395	96	155 / 161	None	ABC12246 ABC14926
MLOC_20685.2	467	1e-68	319 - 466	99	146 / 148	None	ABC12246
MLOC_20685.1	677	1e-68	527 - 677	98	149 / 152	None	ABC12246