barSeed - Barley Seed Development Database

Probe ABC00405

Source Contig ABC00405

barSeed

Links

Affymetrix Source Sequence (296 bp)

>ABC00405 296
GACACCAACCTTTGCGCCATCCACGCCAAGCGGGTCCCCTTCATGCCCAAGGACATCCAG
TTCGCTCGCCGCATCCGTGAAAAAAGGGCCTAGGCTCCAGTTTGAGATCCATGCGTCGTC
TTTTAGATCCCTGTTAGGCATCGGTGGAAATGTGTGTGCTGCAAGTGTTTCAAAATGTGT
CTGTGTTGTTCTTGTCATGGTGGGTGTGTTGTGCCTAATCTGATGGCCCCTTTTTGTTGC
CATCACCAATGGAAATGAAAATGTTGCCTTCCTGTTCTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK376214	661	6e-121	379 - 658	95	265 / 280	CUST_1696_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00179 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00405 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC29964 ABC31599 ABC32138 ABC47839
MLOC_79434.1	535	6e-121	173 - 452	95	265 / 280	CUST_1696_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00405 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC29964 ABC31599 ABC32138 ABC47839
AK375327	649	3e-84	386 - 649	88	244 / 278	CUST_1696_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00179 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00405 ABC00484 ABC00570 ABC00657 ABC00660 ABC00669 ABC00672 ABC00676 ABC00684 ABC00701 ABC00787 ABC00971 ABC31599 ABC32001 ABC32138 ABC47839
MLOC_15473.1	390	2e-61	197 - 365	92	158 / 172	CUST_1672_PI390587928 CUST_1696_PI390587928	ABC00405 ABC29964 ABC32138