barSeed - Barley Seed Development Database

Probe ABC36259

Source Contig ABC36259

barSeed

Links

Affymetrix Source Sequence (652 bp)

>ABC36259 652
GCTGATCCGCTCCAAGTGGGTGCCTTGTCTCGAGTTCAGCAAGGTTGGATTCATCTTCCG
TGAGCACAATGCCTCTCCAGGGTATTACGATGGCCGATACTGGACAATGTGGAAGCTACC
TATGTTTGGGTGCACCGACGCCACACAGGTGTTAAACGAAGTGGAGGAGGTCAAGAAGGA
GTACCCTGACGCCTATGTCCGCATCATCGGATTCGACAACATGCGTCAGGTGCAGTGCGT
CAGCTTCATCGCCTTCAAGCCACCAGGCTGCGAGGAGTCTGGCAAGGCCTAAACAAGCTA
ACTCCCTTTTATCATACAACATGGTTTCGTGCCAGGGACATGTTTTAACCATGAGGGTCG
TATTTTATCATGGTGTTGGATCCCAAGTTTTTATGGATTCTTTTTTCGTTACCGGGGTCG
ACCCCAAAGCCGTAATCTCTGGTTTGAATATTGTTATATTTCTCACCGAGTAACAATGGT
ATAAAAGAGACGATATTTATGAAAAAAAATCTAAGACATTGTATGAGTCGTCTATTATTC
ACATGTATTTTAGTCTTTATTTCAATCCTCCTATATTTATAGGATTTGTAATGGTAAATA
TAAAGATAACATTAAAAAATAATTGATTGGATCACAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK252634.1	2122	4e-176	246 - 580	100	335 / 335	CUST_40537_PI390587928 CUST_34592_PI390587928 CUST_5460_PI390587928 CUST_7871_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC01926 ABC01929 ABC01931 ABC35392 ABC36259 ABC45928
AK364796	4776	4e-176	2347 - 2681	100	335 / 335	CUST_13700_PI390587928 CUST_34600_PI390587928 CUST_28649_PI390587928 CUST_40537_PI390587928 CUST_34592_PI390587928 CUST_9769_PI390587928 CUST_3325_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC11228 ABC14500 ABC35392 ABC36259 ABC45928
MLOC_44795.3	1330	4e-176	370 - 704	100	335 / 335	CUST_40537_PI390587928 CUST_34592_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC21951 ABC35392 ABC36259 ABC45928
MLOC_44795.2	1219	4e-176	665 - 999	100	335 / 335	CUST_34600_PI390587928 CUST_40537_PI390587928 CUST_34592_PI390587928 CUST_9769_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928
MLOC_44795.1	1069	4e-176	597 - 931	100	335 / 335	CUST_40537_PI390587928 CUST_34592_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928
MLOC_44795.5	1880	6e-159	365 - 668	100	304 / 304	CUST_41792_PI390587928 CUST_2840_PI390587928 CUST_26546_PI390587928	ABC21951 ABC36259
MLOC_44795.4	1779	6e-159	365 - 668	100	304 / 304	CUST_41792_PI390587928 CUST_2840_PI390587928 CUST_26546_PI390587928	ABC21951 ABC36259
AK249082.1	978	3e-127	411 - 711	94	284 / 302	CUST_5031_PI390587928 CUST_34592_PI390587928 CUST_131_PI390587928 CUST_34584_PI390587928 CUST_38622_PI390587928 CUST_40535_PI390587928 CUST_34605_PI390587928 CUST_5626_PI390587928 CUST_8607_PI390587928 CUST_40537_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726 ABC52601
AK249588.1	1172	3e-127	619 - 919	94	284 / 302	CUST_5031_PI390587928 CUST_34592_PI390587928 CUST_131_PI390587928 CUST_34584_PI390587928 CUST_38622_PI390587928 CUST_40535_PI390587928 CUST_5626_PI390587928 CUST_8607_PI390587928 CUST_40537_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC11072 ABC35392 ABC36259 ABC45928 ABC49726 ABC52601
AK248995.1	983	3e-127	410 - 710	94	284 / 302	CUST_34592_PI390587928 CUST_34584_PI390587928 CUST_38622_PI390587928 CUST_34605_PI390587928 CUST_40537_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726
AK250591.1	1609	3e-127	1092 - 1392	94	284 / 302	CUST_5031_PI390587928 CUST_34592_PI390587928 CUST_131_PI390587928 CUST_34584_PI390587928 CUST_38622_PI390587928 CUST_40535_PI390587928 CUST_5626_PI390587928 CUST_8607_PI390587928 CUST_40537_PI390587928	ABC00308 ABC00346 ABC00446 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726 ABC52601
AK369652	2395	3e-127	1874 - 2174	94	284 / 302	CUST_5031_PI390587928 CUST_34592_PI390587928 CUST_131_PI390587928 CUST_34584_PI390587928 CUST_38622_PI390587928 CUST_40535_PI390587928 CUST_5626_PI390587928 CUST_8607_PI390587928 CUST_40537_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726 ABC52601
AK360618	4810	3e-127	1391 - 1691	94	284 / 302	CUST_5031_PI390587928 CUST_34592_PI390587928 CUST_131_PI390587928 CUST_34584_PI390587928 CUST_38622_PI390587928 CUST_28839_PI390587928 CUST_40535_PI390587928 CUST_5626_PI390587928 CUST_8607_PI390587928 CUST_40537_PI390587928 CUST_17538_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC09523 ABC10724 ABC35392 ABC36259 ABC43245 ABC45683 ABC45928 ABC49726 ABC52601
MLOC_64679.1	900	3e-127	340 - 640	94	284 / 302	CUST_9745_PI390587928 CUST_34592_PI390587928 CUST_34584_PI390587928 CUST_38622_PI390587928 CUST_40537_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726
AK252245.1	808	7e-109	301 - 592	91	266 / 292	CUST_35758_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00938 ABC00965 ABC00997 ABC01004 ABC35392 ABC36259 ABC40544 ABC45928
AK252708.1	811	8e-108	284 - 576	91	266 / 293	None	ABC00308 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC26838 ABC35392 ABC36259 ABC45928
AK249454.1	954	4e-106	278 - 570	90	265 / 293	CUST_3649_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00938 ABC00965 ABC00997 ABC01004 ABC27839 ABC35392 ABC36259 ABC45928
AK358991	2554	4e-106	279 - 571	90	265 / 293	CUST_9768_PI390587928 CUST_19879_PI390587928 CUST_3649_PI390587928 CUST_28144_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00938 ABC00965 ABC00997 ABC01004 ABC26838 ABC27839 ABC29836 ABC35392 ABC36259 ABC45389 ABC45928
AK252711.1	1719	4e-106	1190 - 1482	90	265 / 293	CUST_19879_PI390587928 CUST_28144_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00938 ABC00965 ABC00997 ABC01004 ABC01192 ABC01198 ABC26838 ABC27839 ABC35392 ABC36259 ABC45389 ABC45928
AK250863.1	1032	4e-106	504 - 796	90	265 / 293	CUST_19879_PI390587928 CUST_28144_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00938 ABC00965 ABC00997 ABC01004 ABC07957 ABC26838 ABC27839 ABC35392 ABC36259 ABC45389 ABC45928
AK356951	852	1e-105	295 - 586	90	264 / 292	CUST_16539_PI390587928 CUST_4653_PI390587928 CUST_2915_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00938 ABC00965 ABC00997 ABC01004 ABC35392 ABC36259 ABC40544 ABC45928
AK355094	3254	1e-105	1035 - 1326	90	264 / 292	CUST_35832_PI390587928 CUST_16539_PI390587928 CUST_4653_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00938 ABC00965 ABC00997 ABC01004 ABC02826 ABC09123 ABC35392 ABC36259 ABC40544 ABC41275 ABC45928
AK249421.1	610	1e-105	121 - 412	90	264 / 292	CUST_16539_PI390587928 CUST_4653_PI390587928	ABC00308 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC35392 ABC36259 ABC40544 ABC45928
AK252627.1	797	2e-104	254 - 546	90	264 / 293	CUST_9765_PI390587928 CUST_19879_PI390587928	ABC00308 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC26838 ABC35392 ABC36259 ABC45389 ABC45928
MLOC_30227.1	929	9e-88	1 - 239	91	218 / 239	None	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00997 ABC01004 ABC36259 ABC45928
AK249868.1	737	7e-84	246 - 486	90	217 / 241	CUST_9765_PI390587928 CUST_19879_PI390587928	ABC00308 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC26838 ABC27839 ABC35392 ABC36259 ABC45389 ABC45928