barSeed - Barley Seed Development Database

Probe ABC09523

Source Contig ABC09523

barSeed

Links

Affymetrix Source Sequence (1045 bp)

>ABC09523 1045
GGGCTGAGGAATTCGGACGAGGATTTCTGTAATAGATATTGATGACACATCTTCCCCTGA
AGTTAGATCTAGTTTGAGAGGACGCAGTAATGGAACCTCGATTAATCCTAACGTAAATGC
ACAGCTGGAGGCTGATGAATTGTTGGCTCGGCAACTTCAGGAGCAGCTTTACAATGAAAC
ACCTCGTGTTGCTCCTCGAGAAGAGATTGATGCGATCGTAGCAATGTCACTTCAACACGA
AGAAGATGCAGAACGGACATCTCGAACTGTAAGAGCACCTGCAAGGCGGTTTCCAAACGA
TACCAGAGCTGCACGGGCATCACGTTTAAGTGCTTCTCAGCGTGGTATTAGGGCCAGATA
TGAGACGGCAATTTCCCATATGCAGAATGCAGCTCCGGTAACTTTGGGTTTGAGGTCTTT
TCGTAGCGGATATCGTGCTGCGCATATTCAACCTAATATTGATTTAAATGATTATGATGC
GCTACTTGCGCTAGATGAAAATAACCACCAGCACACTGGTGCTTCGGAAAGTCAGATCAA
TAACTTGCCTCAGTCAGTATTTCAGTCAACTAGCACTGAAGAGCCTTGTGCGGTCTGCCT
GGAAAATCCATCTTTTGGAGATACCATCCGCACTTTGCCATGCTTTCACAAGTTCCATAA
AGAGTGCATCGACGAATGGCTGAGAAGAAAGAAACTGTGCCCTGTTTGCAAGTGTGGGAT
TACAAGTAGTTAGCAAATGCAGTTTTAGTTTTCGTGTTCTTCCCTTTGAGCACAACTTAA
CTCAGCTGCATCTCTGGATGCATTTTTTCTGTTGGTAGTGGTACATATCGTATCATAGGG
TTGCCCTCGGGTGTTCTGCCAATGCCCCGTGGTGCATTTTGTTCCGATGGATCATACTTA
ATAATCCATATTTTCCGTCTTCACCATTTTTGTATATCCATGATACTTACAAGTTATAAC
TGGCATGTTGTTCTGCAGTGCATAAGATGCTTGTCAGATATGACGTAATACCATTGCGAG
ATTAAAGAGAACACATTAAGTTAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_76729.1	2656	0.0	1 - 1010	100	1010 / 1010	CUST_17538_PI390587928 CUST_28839_PI390587928	ABC09523 ABC45683
AK360618	4810	0.0	3804 - 4810	100	1007 / 1007	CUST_34592_PI390587928 CUST_5031_PI390587928 CUST_5626_PI390587928 CUST_8607_PI390587928 CUST_17538_PI390587928 CUST_34584_PI390587928 CUST_38622_PI390587928 CUST_40537_PI390587928 CUST_40535_PI390587928 CUST_28839_PI390587928 CUST_131_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC09523 ABC10724 ABC35392 ABC36259 ABC43245 ABC45683 ABC45928 ABC49726 ABC52601
MLOC_76729.2	2638	0.0	1 - 954	100	954 / 954	CUST_28839_PI390587928 CUST_17538_PI390587928	ABC09523 ABC45683
MLOC_76729.3	2453	0.0	1 - 893	100	893 / 893	CUST_17538_PI390587928 CUST_28839_PI390587928	ABC09523 ABC45683
MLOC_76729.5	2148	0.0	113 - 502	100	390 / 390	CUST_17538_PI390587928 CUST_28839_PI390587928	ABC09523
MLOC_76729.4	1960	2e-150	142 - 430	100	289 / 289	CUST_17538_PI390587928 CUST_28839_PI390587928	ABC09523