barSeed - Barley Seed Development Database

Probe ABC49726

Source Contig ABC49726

barSeed

Links

Affymetrix Source Sequence (283 bp)

>ABC49726 283
CAACATGCGTCAGTTGCAGTGCGACAGCTTCATCGCCTTCAAGCCACCAGGCTGCGAGGA
GCCCCCCCACGCATAAACAGCTCACTGACGATGGGCCACATATAAAGTGCCATTGCAGTT
TTGTCAACTCTGACATTGCTTTGGGTTTTCCTTCTCCATTATCTTTCTTATTTGTTCCTA
AAAATGTGTGTATGCCCATGTTCATGTACCAACATGGCTGCGATTTTAGCATGCTCGTAT
GTGCATACAATCGGTGGCTATGTATATGCTCTAGAGACATAAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_64679.1	900	3e-114	555 - 821	94	254 / 269	CUST_34584_PI390587928 CUST_34592_PI390587928 CUST_40537_PI390587928 CUST_38622_PI390587928 CUST_9745_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726
AK248995.1	983	4e-112	625 - 890	94	253 / 269	CUST_40537_PI390587928 CUST_34584_PI390587928 CUST_34592_PI390587928 CUST_34605_PI390587928 CUST_38622_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726
AK249082.1	978	1e-102	626 - 893	92	248 / 270	CUST_8607_PI390587928 CUST_40535_PI390587928 CUST_38622_PI390587928 CUST_34605_PI390587928 CUST_5626_PI390587928 CUST_34592_PI390587928 CUST_5031_PI390587928 CUST_131_PI390587928 CUST_34584_PI390587928 CUST_40537_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726 ABC52601
AK249588.1	1172	1e-102	834 - 1101	92	248 / 270	CUST_8607_PI390587928 CUST_40535_PI390587928 CUST_38622_PI390587928 CUST_5626_PI390587928 CUST_34592_PI390587928 CUST_5031_PI390587928 CUST_40537_PI390587928 CUST_34584_PI390587928 CUST_131_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC11072 ABC35392 ABC36259 ABC45928 ABC49726 ABC52601
AK250591.1	1609	1e-102	1307 - 1574	92	248 / 270	CUST_5031_PI390587928 CUST_34584_PI390587928 CUST_131_PI390587928 CUST_40537_PI390587928 CUST_40535_PI390587928 CUST_38622_PI390587928 CUST_8607_PI390587928 CUST_34592_PI390587928 CUST_5626_PI390587928	ABC00308 ABC00346 ABC00446 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726 ABC52601
AK369652	2395	1e-102	2089 - 2356	92	248 / 270	CUST_5626_PI390587928 CUST_34592_PI390587928 CUST_8607_PI390587928 CUST_40535_PI390587928 CUST_38622_PI390587928 CUST_40537_PI390587928 CUST_34584_PI390587928 CUST_131_PI390587928 CUST_5031_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726 ABC52601
AK360618	4810	1e-102	1209 - 1476	92	248 / 270	CUST_40537_PI390587928 CUST_28839_PI390587928 CUST_34584_PI390587928 CUST_131_PI390587928 CUST_17538_PI390587928 CUST_5031_PI390587928 CUST_34592_PI390587928 CUST_5626_PI390587928 CUST_38622_PI390587928 CUST_40535_PI390587928 CUST_8607_PI390587928	ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00938 ABC00965 ABC00966 ABC00997 ABC01004 ABC09523 ABC10724 ABC35392 ABC36259 ABC43245 ABC45683 ABC45928 ABC49726 ABC52601