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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34605_PI390587928Hv_44K_v2AATGTATAGATGTGAATCTGATTTGCAGGTGTGGCCCATCGAGGGCATCAAGAAGTTCGA275GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.8742.6721.4751.1020.2060.370
Raw 75.259174.62279.741110.8865.39111.965



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK248995.19832e-24292 - 35110060 / 60plus ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726
MLOCAK249082.19787e-23293 - 3529859 / 60plus ABC00308 ABC00346 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00934 ABC00965 ABC00966 ABC00997 ABC01004 ABC35392 ABC36259 ABC45928 ABC49726 ABC52601
Harvest21ABC432123993e-25276 - 33510060 / 60plus
Harvest21ABC435853641e-23272 - 3319859 / 60plus
Harvest35U35_1933993e-25276 - 33510060 / 60plus



Contig Sequence (399 bp)

>U35_193 399 Hv_44K_v2
CTTCTAGCAAGCTATATACCTACATAGTACAGCTATGGCCCCCACCGTGATGGCCTCATC
GGCCACCTCCGTCGCTCCTTTCCAGGGGCTCAAGTCCACCGCCGGCCTTCCCGTCAGCCG
CCGCTCGAACGGCGCTAGCCTCGGCAGCGTCAGCAACGGTGGAAGGATCAGGTGCATGCA
GGTAAACAACATCGTCTCTGTCTTTCTAGTCATTTTTAAGCTGACCGATGTCAAGAAGAA
CAATCAAACGTGTAGAACTAGAGTTATAGTCTCTTAATGTATAGATGTGAATCTGATTTG
CAGGTGTGGCCCATCGAGGGCATCAAGAAGTTCGAGACCCTGTCTTACTTGCCACCACTC
AGCACGGAGGCCCTCCTTAAGCAGGTCGACTACCTGATC



Homology of Contig U35_193 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None