barSeed - Barley Seed Development Database

Probe ABC21951

Source Contig ABC21951

barSeed

Links

Affymetrix Source Sequence (816 bp)

>ABC21951 816
GATGGTTTCTGCTGTTGCGCATGCTTCTCAGCGTGTTCATTCGACGTCCTTGGGCTCCTC
TTCTTTTGTTGGTGATCCTGATGGGGGTTGCTGGGGTTGGCTGTCGATGGTGGTTCTATT
CCTGGCTTGAGGGCTGATGAGGCGGACGCCGCCGCCAGGATCGGATGCGGCTCCTTCGTC
GTCTTCCTAGGACGCCCTCCCTTCATCTCCTCTTCGTCGGGTCATCAACCATCGAGTAGG
GAGGTGCACACATAGGCCATGGCTGATTGAGGAGGAACTTGCTTCGGTGGGCTGTAGTGG
CGGCTTGGATTTCCTTCTCCCGAGGCGACACGGTGTTCCTCAACCCAAATGTTTCCCTGA
GGAGCACCACCATGCCTCACCATCGGACGCATCACTGCAAGTACCACCACCACAATAATA
TGTCGGTCCTTCATTTCCCCATCACCTACTAGCCAAGGTCCACCTCTGGGTAAGCTCCTT
TGGGTTCAGTTATGGCTTCTCAAGCACGCTAGATTTTTCCCGTGATTTCTTTTTTCATGA
TAGACCTGCGTTTTGTGGCGGAGTAGCATAAAAATTTCTATTTCTTCACTAGTTTACTTG
CCGAAGGTTAGATTGCAAGAGGTGGCAAGCCGGTAGGAGGTAACCTCGAAATCAGCGACA
GTGAGCCGGTGACGACGGTGGTTGACACAATGGCCGAGGGAAATTTTCAATTCGTGCTGC
TTTTTTTTCTGAATTATTTGGATCACAATCACTTGAGTTTACTGTTTTTGCAGTGTCAAA
TCATCCATCATTGACACCTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_44795.4	1779	0.0	875 - 1673	100	799 / 799	CUST_41792_PI390587928 CUST_2840_PI390587928 CUST_26546_PI390587928	ABC21951 ABC36259
MLOC_44795.5	1880	9e-59	1644 - 1767	100	124 / 124	CUST_41792_PI390587928 CUST_2840_PI390587928 CUST_26546_PI390587928	ABC21951 ABC36259
MLOC_44795.3	1330	0.0	756 - 1224	100	469 / 469	CUST_40537_PI390587928 CUST_34592_PI390587928	ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC21951 ABC35392 ABC36259 ABC45928
MLOC_64610.1	1262	0.0	162 - 974	82	682 / 828	None	ABC21951
MLOC_8134.1	1197	8e-169	16 - 676	84	557 / 665	None	ABC21951