barSeed - Barley Seed Development Database

Probe ABC00926

Source Contig ABC00926

barSeed

Links

Affymetrix Source Sequence (1014 bp)

>ABC00926 1014
CACGAGCTCCGACCTTCAGCCTCTCCACACCTACTGCTCATTCTTGGAGAACAAAATACA
GCATACACAAGACCTCCATCGACAACAATGGCGGCAACGACCATGTCCCTCTCTTCCCCA
GCCTTTGCCGGCAAGGTAGTGAAGGACTTGCCATCGTCGTCTCTTTTCGGGGAGGCTCGC
GTCACCATGCGCAAGACGGCGGCAAAGGCCAAGAAGGTTGCCTCCAGCAGCCCGTGGTAC
GGCTCTGACCGGGTCCTCTACCTCGGCCCACTTTCTGGTGAGCCCCCGAGCTACCTGACC
GGTGAGTTCCCCGGTGACTACGGGTGGGACACCGCTGGACTGTCGGCTGACCCAGAGACC
TTCGCCAAGAACCGGGAGCTCGAGGTGATCCATTGCCGTTGGGCCATGCTTGGCGCGCTC
GGTTGTGTCTTCCCCGAGCTGCTCGCCCGCAACGGTGTTAAGTTCGGTGAGGCTGTTTGG
TTCAAGGCTGGATCTCAGATCTTCAGCGAGGGTGGCCTTGACTACCTCGGCAACCCAAGC
CTTGTGCACGCCCAGAGTATCCTTGCCATTTGGGCTTGTCAGGTTGTGCTCATGGGTGCC
GTTGAGGGTTACCGCATTGCTGGTGGACCACTTGGTGAGATCGTCGACCCATTATACCCG
GGTGGCAGCTTCGACCCGCTCGGCCTTGCTGACGACCCGGAGGCATTCGCCGAGCTCAAG
GTTAAGGAGGTCAAGAACGGTCGCCTCGCCATGTTCTCCATGTTTGGATTCTTTGTTCAA
GCCATCGTCACCGGCAAAGGTCCACTCGAGAACCTTGCTGACCACCTCGCCGACCCTGTC
AACAACAATGCTTGGGCATTCGCCACCAACTTCGTTCCCGGCAAGTAAGGTGTCTTGAAG
ACCCATGGTGAAGTGTGCCGTTGTGTGGTCTGAGTTGTACTACCACGATGTAAATTATGA
ATATTCTATGCAAAATCAGTTATATTTGCCCAGTTCCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK252089.1	1119	0.0	148 - 1119	99	968 / 972	CUST_13384_PI390587928	ABC00006 ABC00189 ABC00194 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC09102 ABC46820 ABC48253
MLOC_73205.1	1276	0.0	236 - 1235	99	985 / 1000	CUST_13384_PI390587928	ABC00006 ABC00194 ABC00418 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC46820 ABC48253
MLOC_945.1	1383	0.0	186 - 1088	90	811 / 903	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
AK250272.1	1007	0.0	43 - 945	90	810 / 903	CUST_13352_PI390587928 CUST_5030_PI390587928	ABC00006 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_78528.2	1256	0.0	127 - 1050	87	808 / 925	CUST_7895_PI390587928	ABC00006 ABC00194 ABC00418 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC48253
MLOC_72290.1	1432	0.0	293 - 1186	86	771 / 896	CUST_10630_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC48253 ABC53022
AK248556.1	1012	0.0	82 - 1009	85	797 / 936	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK248909.1	977	0.0	64 - 954	85	764 / 898	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK370975	1122	0.0	16 - 965	84	800 / 955	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
AK253131.1	1012	0.0	21 - 1009	83	832 / 1002	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
MLOC_58758.2	1185	0.0	37 - 915	85	747 / 879	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_58758.3	982	0.0	36 - 914	85	747 / 879	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
AK358669	1024	0.0	55 - 931	85	744 / 877	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00841 ABC00926 ABC26749 ABC32758 ABC53022
MLOC_81109.1	1237	0.0	283 - 1086	86	689 / 804	CUST_35720_PI390587928	ABC00006 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00828 ABC00837 ABC00926 ABC00944 ABC00981 ABC01012 ABC26767 ABC53022
AK252077.1	1014	0.0	64 - 881	85	698 / 818	CUST_2914_PI390587928	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
AK356022	968	0.0	57 - 965	83	761 / 912	None	ABC00006 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC25177 ABC53022
AK250765.1	1054	0.0	80 - 883	85	684 / 804	None	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00433 ABC00606 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
MLOC_44067.1	1132	0.0	132 - 935	85	684 / 804	CUST_13391_PI390587928	ABC00006 ABC00194 ABC00422 ABC00425 ABC00433 ABC00828 ABC00926 ABC00949 ABC00981 ABC01012 ABC26767 ABC53022
AK372776	1096	0.0	93 - 878	85	671 / 789	CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00981 ABC01012 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_29257.1	953	0.0	289 - 953	86	573 / 665	None	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012
MLOC_945.2	911	2e-90	111 - 396	88	253 / 286	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_41838.1	787	0.0	171 - 786	86	532 / 618	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_7198.1	839	2e-175	239 - 839	85	512 / 601	None	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC25177
AK356138	877	2e-146	178 - 771	83	493 / 597	None	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
AK248335.1	1078	2e-146	274 - 867	83	493 / 597	CUST_35749_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_22471.1	923	2e-146	261 - 854	83	493 / 597	CUST_16534_PI390587928 CUST_35749_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_22471.2	1220	2e-146	158 - 751	83	493 / 597	CUST_16534_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_78528.1	881	1e-63	593 - 795	89	180 / 203	CUST_7895_PI390587928	ABC00006 ABC00194 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC48253
MLOC_67012.1	762	2e-125	349 - 757	87	354 / 409	CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC00981 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_71603.1	698	1e-123	272 - 698	85	365 / 427	None	ABC00006 ABC00194 ABC00425 ABC00433 ABC00606 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926
MLOC_44068.1	650	5e-122	203 - 650	84	378 / 448	None	ABC00189 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00841 ABC00926 ABC53022
MLOC_35646.1	260	5e-77	15 - 255	88	213 / 241	None	ABC00194 ABC00418 ABC00628 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012
MLOC_67011.1	1952	1e-73	1726 - 1948	89	199 / 223	CUST_37480_PI390587928 CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00951 ABC00981 ABC26749 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_58758.1	943	5e-72	141 - 421	85	238 / 281	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758
MLOC_32563.1	302	3e-64	77 - 302	87	196 / 226	CUST_7897_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC26749 ABC32758 ABC53022