barSeed - Barley Seed Development Database

Probe ABC00951

Source Contig ABC00951

barSeed

Links

Affymetrix Source Sequence (732 bp)

>ABC00951 732
GATACTTGCATTTAAACATCTGTCTCGCGATTACAAATCAATGTGAAAGAAAACCATCCC
GGGTGATCTCTTAGTTGCTATACAAAAGTAACGGCCCTCCCCCAGCTAAAGCAGTACATT
CACATTTCTGTTCATACTGCTGCTGTTTTAAGGGTGAGAAAATCAGAAATTTGGTTTGTG
TAGAAATCTGGCTGGATCGTGTTGTCGGGGCTCTGAAGCATCTGCACAGAAGTCACACCT
GAAAGAACCAGGAGAGTTTTGCAGCCTCCATTTTGCCCAAATAGAACGTCAGTATCCAAA
CGGTCACCTACCATGCATATCTGAGATGTTGTGATTCCAAACTTCTTTGCCAGGTAGTCC
ATCATGACCCACTCGGAGAGATCGTCGACCCACTATACCCCGGTGGCAGCTTCGACCCCC
TTGGCCTTGCAGACGACCCCGAGGCGTTTGCCGAGCTCAAGGTGAAGGAGATCAAGAACG
GTCGTCTTGCAATGTTTTCCATGTTTGGATACTTTGTGCAAGCCATCGTCACTGGTAAGG
GCCCGCTCGAGAACCTCGCTGACCACCTCGCCGACCCCGTCAACAACAACGCGTGGGCCT
TCGCCACCAACTTCGTGCCCGGCAAGTAAACACTTGAAAATCGAGTTCTCATGAGTATGT
GTGTACTCTGGATGTATGCTAAATCGGATCGTTATGTTGACACCATCAAAGATGTTACAA
TTAGGGCCCATA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_59521.1	1437	0.0	25 - 392	99	365 / 368	CUST_9326_PI390587928 CUST_7612_PI390587928	ABC00588 ABC00951
MLOC_69498.1	1386	0.0	262 - 632	98	364 / 371	CUST_35738_PI390587928	ABC00006 ABC00189 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC25177 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC53022
MLOC_59521.2	1509	5e-180	1 - 345	99	344 / 345	CUST_9326_PI390587928 CUST_7612_PI390587928	ABC00588 ABC00951
MLOC_59521.3	778	7e-179	1 - 343	99	342 / 343	CUST_9326_PI390587928 CUST_7612_PI390587928	ABC00588 ABC00951
AK250765.1	1054	2e-90	621 - 882	90	235 / 262	None	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00433 ABC00606 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
AK248909.1	977	2e-90	602 - 863	90	235 / 262	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_44927.1	838	2e-90	413 - 674	90	235 / 262	CUST_13341_PI390587928	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
MLOC_41838.1	787	8e-89	262 - 523	89	234 / 262	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK248556.1	1012	4e-87	623 - 884	89	233 / 262	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK372776	1096	2e-84	619 - 878	88	230 / 260	CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00981 ABC01012 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_67012.1	762	2e-84	349 - 608	88	230 / 260	CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC00981 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_72290.1	1432	8e-84	834 - 1095	88	231 / 262	CUST_10630_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC48253 ABC53022
MLOC_56052.1	1307	2e-79	372 - 638	87	232 / 267	CUST_35771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00949 ABC00951 ABC00981 ABC26749 ABC31752 ABC53022
MLOC_67011.1	1952	2e-74	1726 - 1952	89	202 / 227	CUST_37480_PI390587928 CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00951 ABC00981 ABC26749 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
AK370975	1122	4e-72	596 - 857	85	224 / 262	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
AK253131.1	1012	6e-70	625 - 882	85	220 / 258	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
MLOC_54581.1	1145	6e-70	1 - 216	89	192 / 216	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00951 ABC00960 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_56051.1	1187	8e-69	332 - 593	85	222 / 262	CUST_7905_PI390587928	ABC00006 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00949 ABC00951 ABC26767
MLOC_22471.1	923	1e-56	257 - 520	82	219 / 267	CUST_16534_PI390587928 CUST_35749_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_22471.2	1220	1e-56	154 - 417	82	219 / 267	CUST_16534_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
AK356138	877	6e-55	512 - 775	82	218 / 267	None	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
AK248335.1	1078	6e-55	608 - 871	82	218 / 267	CUST_35749_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022