barSeed - Barley Seed Development Database

Probe ABC00074

Source Contig ABC00074

barSeed

Links

Affymetrix Source Sequence (330 bp)

>ABC00074 330
CTTCGTCCAGGCCATCGTCACCGGCAAGGGCCCCCTCGAGAACCTCGCCGACCACCTCGC
CGACCCCGTCAACAACAACGCCTGGGCCTTCGCCACCAACTTCGTCCCCGGCAAGTGAGC
TCAACCTCTAGCGCGCGCGCGCGCGCGCGCGCTTGGCCGACAACTTCATTGCTGATGGAT
GCTGCTGTGCTGCATGTCTTTCCGGACTGATAGATGTTGCATGTGAGGGCGAGTCGAGAT
GATGAGTTGGTGTGTGTACACTAAAAAGATGGTGTTTGTGTAATATCTGGTTATTTTTCA
GATTAACCAAGGCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK372776	1096	1e-143	763 - 1079	96	304 / 317	CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00981 ABC01012 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_67011.1	1952	1e-143	1525 - 1841	96	304 / 317	CUST_37480_PI390587928 CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00951 ABC00981 ABC26749 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_67012.1	762	1e-143	148 - 464	96	304 / 317	CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC00981 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022