barSeed - Barley Seed Development Database

Probe ABC53022

Source Contig ABC53022

barSeed

Links

Affymetrix Source Sequence (934 bp)

>ABC53022 934
AGACACCTTAGCACTCCAATGGCGGCCACCACCATGTACCTCTCCTCATCGACATTCGCC
GGAAAGGCGGTGAAGAATGTCCCATTATCGGCTCTCTTCGGTGAGGCTCGCGTCACCATG
CGCAAGACCGCGGCGAAAGCTAAGCAAGTTTCCTCCAGCAGCCCATGGTACGGAGCTGAT
CGTGTGCTCTACCTCGGCCCACTCTCTCGCGAGCCCCCAAGCTACCTCACCGGTGATTTC
CCCGGTGACTACGGGTGGGACACGGCTGGACTCTCTGCTGACCCCGAGACCTTCTCGAAG
AACCGCGAGTTGGAGGTGATACACTGCCGCTGGGCTATGCTTGGTGCACTGGGTTGCGTG
TTCCCTGAGTTGCTTGCCCGCAATGGCGTGAAGTTCGGCGAGGCTGTCTGGTTCAAGGCC
GGCTCGCAAATCTTCAGCGAGGGTGGCCTCGACTACCTCGGCAACCCAAGCCTCGTCCAT
GCTCAGAGCATCCTTGCCATTTGGGCTTGCCAGGTTGTGCTCATGGGCGCTGTTGAGGGG
TACCGTGTTGCTGGCGGCCCACTCGGCGAGATCGTCGACCCTCTCTACCCGGGTGGAAGG
TTTGACCCACTTGGCCTGGCCGAGCGACCCCAAGCATTCGACGCGCTCAAGGTGAAGGAG
ATCAAGAACGGCCGCCTTGCCATGTTCTCGATGTTTGGCTTTCTTGTCCAGGCCATAGTC
ACCGGCAAGGGCCCTCTTGAGAACCTCGCTGACCACATCGCCGACCCCGTCAACAACAAC
GCTTGGGCATTTGCCACAAACTTCGTCCCCGGCAAATAAGGTGTCCCGGAGACTAGTCAT
GTTGAAGTGTGAGGTTGTGTGGTTTGATTTGTACTACCATGATGTAGATTATGAGAATTC
TATGGAGAAGCATTGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK370975	1122	0.0	39 - 955	97	892 / 919	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
AK253131.1	1012	0.0	68 - 984	97	890 / 919	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
AK358669	1024	0.0	39 - 960	93	857 / 924	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00841 ABC00926 ABC26749 ABC32758 ABC53022
MLOC_72290.1	1432	0.0	283 - 1176	85	763 / 896	CUST_10630_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC48253 ABC53022
AK356022	968	0.0	48 - 959	84	774 / 916	None	ABC00006 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC25177 ABC53022
AK248556.1	1012	0.0	72 - 962	85	758 / 893	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_56052.1	1307	0.0	376 - 1189	86	701 / 815	CUST_35771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00949 ABC00951 ABC00981 ABC26749 ABC31752 ABC53022
MLOC_58758.4	1225	0.0	153 - 1065	84	767 / 915	CUST_38589_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00949 ABC01012 ABC25177 ABC32758 ABC53022
MLOC_58758.2	1185	0.0	16 - 925	84	763 / 912	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_58758.3	982	0.0	15 - 924	84	763 / 912	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
AK248909.1	977	0.0	54 - 944	84	752 / 896	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK248894.1	957	0.0	36 - 935	84	755 / 902	CUST_35629_PI390587928	ABC00006 ABC00347 ABC00433 ABC00628 ABC00837 ABC00841 ABC00949 ABC00960 ABC25177 ABC26749 ABC26767 ABC32758 ABC53022
AK252077.1	1014	0.0	54 - 871	85	696 / 819	CUST_2914_PI390587928	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_81109.1	1237	0.0	283 - 1086	85	685 / 807	CUST_35720_PI390587928	ABC00006 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00828 ABC00837 ABC00926 ABC00944 ABC00981 ABC01012 ABC26767 ABC53022
MLOC_44067.1	1132	0.0	132 - 935	84	681 / 806	CUST_13391_PI390587928	ABC00006 ABC00194 ABC00422 ABC00425 ABC00433 ABC00828 ABC00926 ABC00949 ABC00981 ABC01012 ABC26767 ABC53022
MLOC_9033.1	1159	0.0	612 - 1156	93	506 / 547	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC26749 ABC26767 ABC32758 ABC53022
AK372776	1096	0.0	150 - 876	85	624 / 730	CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00981 ABC01012 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_4849.1	1378	0.0	161 - 956	84	669 / 801	CUST_4869_PI390587928 CUST_35760_PI390587928	ABC00006 ABC00422 ABC00425 ABC00828 ABC00837 ABC00944 ABC00981 ABC01012 ABC26767 ABC26824 ABC26853 ABC53022
MLOC_69498.1	1386	0.0	371 - 1078	85	609 / 716	CUST_35738_PI390587928	ABC00006 ABC00189 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC25177 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC53022
MLOC_44068.1	650	0.0	187 - 650	94	438 / 464	None	ABC00189 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00841 ABC00926 ABC53022
MLOC_41838.1	787	5e-161	181 - 783	84	507 / 605	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_22471.1	923	1e-142	265 - 854	82	488 / 593	CUST_16534_PI390587928 CUST_35749_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_22471.2	1220	1e-142	162 - 751	82	488 / 593	CUST_16534_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
AK356138	877	5e-141	178 - 767	82	487 / 593	None	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
AK248335.1	1078	5e-141	274 - 863	82	487 / 593	CUST_35749_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_67012.1	762	5e-136	351 - 757	88	361 / 409	CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC00981 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_4849.2	933	7e-135	318 - 806	85	415 / 491	None	ABC00006 ABC00422 ABC00425 ABC00828 ABC00837 ABC00981 ABC26767 ABC26824 ABC26853 ABC53022
MLOC_42878.1	376	3e-114	123 - 376	96	244 / 254	None	ABC00006 ABC00432 ABC00617 ABC00837 ABC53022
MLOC_49099.1	311	1e-77	1 - 164	99	163 / 165	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00432 ABC00617 ABC26749 ABC53022
MLOC_54581.1	1145	3e-74	1 - 294	84	249 / 296	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00951 ABC00960 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_67011.1	1952	1e-67	1728 - 1939	89	190 / 214	CUST_37480_PI390587928 CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00951 ABC00981 ABC26749 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_32563.1	302	8e-55	43 - 302	82	215 / 261	CUST_7897_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC26749 ABC32758 ABC53022