barSeed - Barley Seed Development Database

Probe ABC00960

Source Contig ABC00960

barSeed

Links

Affymetrix Source Sequence (324 bp)

>ABC00960 324
GCACGAGGTCAATGTTTGGCTTCTTTGTCCAAGCCATCGTCACGGGCAAGGGCCCACTCG
AGAACCTCGCTGACCACATCGCCGACCCCGTCAACAACAATGCATGGGCCTTCGCCACCA
ACTTTGTCCCCGGCAAGTAAGGTGTCTTGGGACTGTGCTCACCATGAGGCGTGTTTTCTT
GTGGTCTGAGTTGTACTACCATGATGTAAATTACGAGAGTTTTGTGCAAAATAATGGTTT
GATTTGTCCACTTCCATGTCGCGCCTTGCATCCGTCTGACCATTTTATTGTGAGCATGGT
TCACGAGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_54581.1	1145	1e-157	85 - 385	100	301 / 301	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00951 ABC00960 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_72290.1	1432	3e-124	964 - 1264	93	281 / 301	CUST_10630_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC48253 ABC53022
AK248556.1	1012	4e-123	753 - 994	99	241 / 242	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_41838.1	787	2e-120	91 - 393	92	280 / 303	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK248909.1	977	1e-98	732 - 977	93	229 / 246	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_32563.1	302	2e-90	2 - 264	90	237 / 263	CUST_7897_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC26749 ABC32758 ABC53022
AK248894.1	957	3e-69	709 - 932	88	199 / 226	CUST_35629_PI390587928	ABC00006 ABC00347 ABC00433 ABC00628 ABC00837 ABC00841 ABC00949 ABC00960 ABC25177 ABC26749 ABC26767 ABC32758 ABC53022
MLOC_58758.2	1185	4e-68	19 - 244	88	200 / 228	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_58758.1	943	4e-68	123 - 348	88	200 / 228	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758
MLOC_58758.3	982	4e-68	18 - 243	88	200 / 228	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
AK252077.1	1014	3e-54	735 - 975	84	204 / 243	CUST_2914_PI390587928	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022