barSeed - Barley Seed Development Database

Probe ABC00628

Source Contig ABC00628

barSeed

Links

Affymetrix Source Sequence (981 bp)

>ABC00628 981
CAGCACTCATCTCCTTGAGAACCCATACAGCGGACACTTTTCTTAGCTTTCCAATGGCGG
CAGCCACCATGTCCCTCTCCTCCTCGACCTTTGCCGGCAAGGCGGTCAAGAACGTACCAT
CTTTGGCTCTCTTTGGGGAGGCCCGAGTCACCATGCGCAAGACCGCAGCAAAGGCGAAGC
AGGTTTCCTCCGGCAGCCCATGGTACGGTGCTGACCGTGTGCTCTACCTTGGCCCACTCT
CCGGTGAGCCCCCGAGCTACCTCACCGGTGAGTTCCCTGGCGACTATGGGTGGGACACTG
CCGGACTTTCAGCTGACCCTGAGACTTTCGCCAAGAACCGGGAGCTGGAGGTGATCCATT
GCCGATGGGCCATGCTCGGGGCACTTGGTTGTGTCTTCCCTGAGTTGCTCGCCCGCAACG
GCGTCAAGTTCGGTGAGGCTGTTTGGTTCAAGGCCGGCTCCCAGATCTTTAGTGAAGGTG
GTCTCGACTACCTCGGCAACCCCAGCCTCGTCCACGCACAAAGCATCCTAGCTATCTGGG
CATGCCAGGTGGTGCTCATGGGTGCCGTCGAGGGGTACCGCATTGCTGGCGGCCCACTTG
GTGAGATCGTCGACCCACTCTACCCAGGTGGCAGCTTCGACCCTCTTGGCCTGGCTGAAG
ACCCTGAGGCATTCGCCGAGCTCAAGGTGAAGGAGATCAAGAACGGTCGCCTCGCCATGT
TCTCAATGTTTGGCTTCTTTGTCCAAGCTATTGTCACGGGCAAGGGCCCACTCGAGAACC
TCTCTGACCACATCGCCGACCCCGTCAACAACAATGCATGGGCATTCGCCACCAACTTTG
TCCCCGGCAAGTAAGGTGTCTTGGGACTATGCTCACCATGAGGCGTGTTGTCCTGTGGTC
TGAGTTGCACTACCATGATGTAAATTACGAGAATTTTGTGCAAAAGAACGGTTCCATTTG
TCCCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_72290.1	1432	0.0	245 - 1204	100	960 / 960	CUST_10630_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC48253 ABC53022
AK248556.1	1012	0.0	32 - 1009	96	937 / 979	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK248909.1	977	0.0	16 - 971	95	915 / 959	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_58758.2	1185	0.0	18 - 958	90	845 / 941	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_58758.3	982	0.0	17 - 957	90	845 / 941	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_58758.4	1225	0.0	144 - 1092	89	846 / 950	CUST_38589_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00949 ABC01012 ABC25177 ABC32758 ABC53022
AK356022	968	0.0	21 - 968	89	845 / 950	None	ABC00006 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC25177 ABC53022
AK252077.1	1014	0.0	21 - 976	89	848 / 956	CUST_2914_PI390587928	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_29257.1	953	0.0	239 - 953	96	684 / 715	None	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012
AK248894.1	957	0.0	5 - 933	89	824 / 929	CUST_35629_PI390587928	ABC00006 ABC00347 ABC00433 ABC00628 ABC00837 ABC00841 ABC00949 ABC00960 ABC25177 ABC26749 ABC26767 ABC32758 ABC53022
MLOC_7198.1	839	0.0	191 - 839	96	623 / 649	None	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC25177
MLOC_41838.1	787	0.0	154 - 786	96	607 / 633	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK253131.1	1012	0.0	56 - 1009	85	818 / 961	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
MLOC_73205.1	1276	0.0	320 - 1228	86	787 / 916	CUST_13384_PI390587928	ABC00006 ABC00194 ABC00418 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC46820 ABC48253
AK370975	1122	0.0	27 - 936	86	786 / 916	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
AK252089.1	1119	0.0	212 - 1119	86	784 / 914	CUST_13384_PI390587928	ABC00006 ABC00189 ABC00194 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC09102 ABC46820 ABC48253
AK358669	1024	0.0	44 - 936	86	769 / 895	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00841 ABC00926 ABC26749 ABC32758 ABC53022
MLOC_78528.2	1256	0.0	132 - 1026	86	766 / 895	CUST_7895_PI390587928	ABC00006 ABC00194 ABC00418 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC48253
MLOC_945.1	1383	0.0	262 - 1068	87	705 / 808	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_56051.1	1187	0.0	330 - 1134	87	701 / 805	CUST_7905_PI390587928	ABC00006 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00949 ABC00951 ABC26767
AK250272.1	1007	0.0	63 - 869	87	703 / 808	CUST_13352_PI390587928 CUST_5030_PI390587928	ABC00006 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_56052.1	1307	0.0	376 - 1190	86	703 / 815	CUST_35771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00949 ABC00951 ABC00981 ABC26749 ABC31752 ABC53022
AK250765.1	1054	0.0	80 - 883	86	691 / 804	None	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00433 ABC00606 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
AK372776	1096	0.0	157 - 878	86	624 / 722	CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00981 ABC01012 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_69498.1	1386	0.0	371 - 1071	86	610 / 707	CUST_35738_PI390587928	ABC00006 ABC00189 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC25177 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC53022
MLOC_58758.1	943	5e-92	122 - 421	87	262 / 300	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758
MLOC_48202.1	675	0.0	261 - 675	94	394 / 418	None	ABC00006 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00949
MLOC_9033.1	1159	7e-160	636 - 1156	86	451 / 523	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC26749 ABC26767 ABC32758 ABC53022
MLOC_54581.1	1145	4e-147	1 - 325	96	311 / 325	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00951 ABC00960 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK356138	877	2e-146	145 - 771	82	514 / 629	None	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
AK248335.1	1078	2e-146	241 - 867	82	514 / 629	CUST_35749_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_22471.1	923	7e-145	261 - 887	82	513 / 629	CUST_16534_PI390587928 CUST_35749_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_22471.2	1220	7e-145	158 - 784	82	513 / 629	CUST_16534_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_44068.1	650	2e-141	192 - 650	86	397 / 459	None	ABC00189 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00841 ABC00926 ABC53022
MLOC_67012.1	762	2e-140	349 - 757	89	363 / 409	CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC00981 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_44927.1	838	2e-140	412 - 838	88	375 / 427	CUST_13341_PI390587928	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
MLOC_945.2	911	4e-78	187 - 396	92	193 / 210	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_78528.1	881	1e-137	132 - 596	86	399 / 465	CUST_7895_PI390587928	ABC00006 ABC00194 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC48253
MLOC_71603.1	698	2e-115	272 - 689	85	354 / 418	None	ABC00006 ABC00194 ABC00425 ABC00433 ABC00606 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926
MLOC_32563.1	302	2e-111	25 - 302	94	260 / 278	CUST_7897_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC26749 ABC32758 ABC53022
MLOC_35646.1	260	2e-75	3 - 255	87	220 / 253	None	ABC00194 ABC00418 ABC00628 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012
MLOC_67011.1	1952	1e-73	1726 - 1948	89	199 / 223	CUST_37480_PI390587928 CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00951 ABC00981 ABC26749 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022