barSeed - Barley Seed Development Database

Probe ABC00837

Source Contig ABC00837

barSeed

Links

Affymetrix Source Sequence (973 bp)

>ABC00837 973
TCCTTGAGAACCCATACAATAGACCCTTCCCTTAGCTTTCCATGGCGGCAGCCACCATGT
CCATCTCCTCCTCGACCTTTGCCGGCAAGACGGTGAAGAACGTACCATCTTTGGCTCTCT
TTGGCGAGGCCCGAGTCACCATGCGCAAGATCGCAGCAAAGGCAAAGCAAGTTTCCTCCG
GCAGCCCATGGTACGGTGCCGACCGTGTGCTCTACCTCGGCCCACTCTCCGGTGAGCCCC
CGAGCTACCTCACCGGTGAGTTCCCTGGCGACTATGGGTGGGACACTGCCGGACTTTCAG
CTGACCCTGAGACCTTTGCCAAGAACCGGGAGCTGGAGGTGATCCATTGCCGATGGGCCA
TGCTCGGGGCACTTGGTTGTGTCTTTCCCGAGTTGCTTGCTCGCAACGGCGTCAAGTTCG
GTGAGGCTGTTTGGTTTAAGGCCGGTTCCCAGATCTTTAGTGAGGGTGGTCTCGACTACC
TTGGCAACCCAAGCCTCGTCCACGCACAAAGTATCCTAGCTATTTGGGCATGCCAGGTGG
TGCTCATGGGTGCCGTCGAGGGGTACCGCATTGCAGGCGGCCCACTCGGTGAGATCGTCG
ACCCACTCTACCCAGGTGGCAGCTTCGACCCTCTTGGCCTGGCTGAAGACCCTGAGGCAT
TCGCCGAGCTCAAGGTGAAGGAGATCAAGAATGGTCGCCTCGCCATGTTCTCAATGTTTG
GCTACTTTGTCCAAGCTATCGTCACTGGAAAGGGCCCACTCGAGAACCTCGCTGACCACA
TCGCCGACCCCGTCAACAACAATGCATGGGCATTCGCCACCAACTTTGTCCCCGGCAAGT
AAGGTGTCTTGTGACTATGCTCATCATGAGGCATGTTGTCCTGTGGTCTGAGTTGTACTA
CCATGATGTAAATTACGAGAATTTTGTGCAAAAGAACGGTTCGATTTGTCCACTTCAAAA
AAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248909.1	977	0.0	24 - 977	97	933 / 957	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK248556.1	1012	0.0	45 - 1009	95	924 / 969	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_72290.1	1432	0.0	253 - 1209	96	915 / 957	CUST_10630_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC48253 ABC53022
AK356022	968	0.0	21 - 968	89	841 / 950	None	ABC00006 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC25177 ABC53022
MLOC_58758.2	1185	0.0	18 - 954	89	833 / 939	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_58758.3	982	0.0	17 - 953	89	833 / 939	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_29257.1	953	0.0	252 - 953	96	672 / 702	None	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012
MLOC_58758.4	1225	0.0	138 - 1092	88	841 / 956	CUST_38589_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00949 ABC01012 ABC25177 ABC32758 ABC53022
MLOC_41838.1	787	0.0	148 - 786	98	628 / 639	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK252077.1	1014	0.0	25 - 976	88	835 / 952	CUST_2914_PI390587928	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
AK248894.1	957	0.0	5 - 933	88	814 / 929	CUST_35629_PI390587928	ABC00006 ABC00347 ABC00433 ABC00628 ABC00837 ABC00841 ABC00949 ABC00960 ABC25177 ABC26749 ABC26767 ABC32758 ABC53022
MLOC_7198.1	839	0.0	199 - 839	94	601 / 641	None	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC25177
AK370975	1122	0.0	44 - 971	85	792 / 931	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
AK253131.1	1012	0.0	73 - 1009	85	801 / 945	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
MLOC_78528.2	1256	0.0	132 - 1025	85	759 / 894	CUST_7895_PI390587928	ABC00006 ABC00194 ABC00418 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC48253
AK250272.1	1007	0.0	64 - 952	85	758 / 891	CUST_13352_PI390587928 CUST_5030_PI390587928	ABC00006 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_945.1	1383	0.0	255 - 1067	87	705 / 814	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_56051.1	1187	0.0	330 - 1132	86	688 / 803	CUST_7905_PI390587928	ABC00006 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00949 ABC00951 ABC26767
MLOC_4849.1	1378	0.0	163 - 962	86	688 / 803	CUST_4869_PI390587928 CUST_35760_PI390587928	ABC00006 ABC00422 ABC00425 ABC00828 ABC00837 ABC00944 ABC00981 ABC01012 ABC26767 ABC26824 ABC26853 ABC53022
MLOC_81109.1	1237	0.0	283 - 1084	85	685 / 802	CUST_35720_PI390587928	ABC00006 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00828 ABC00837 ABC00926 ABC00944 ABC00981 ABC01012 ABC26767 ABC53022
AK250765.1	1054	0.0	104 - 883	85	665 / 780	None	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00433 ABC00606 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
MLOC_69498.1	1386	0.0	371 - 1071	86	611 / 707	CUST_35738_PI390587928	ABC00006 ABC00189 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC25177 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC53022
AK372776	1096	0.0	157 - 878	86	618 / 722	CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00981 ABC01012 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_48202.1	675	0.0	269 - 675	95	391 / 410	None	ABC00006 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00949
MLOC_58758.1	943	2e-90	122 - 421	87	263 / 302	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758
MLOC_54581.1	1145	3e-148	1 - 330	95	315 / 330	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00951 ABC00960 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_67012.1	762	4e-132	349 - 757	88	358 / 409	CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC00981 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_78528.1	881	6e-131	132 - 596	85	395 / 465	CUST_7895_PI390587928	ABC00006 ABC00194 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC48253
MLOC_44927.1	838	2e-130	412 - 838	86	369 / 427	CUST_13341_PI390587928	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
MLOC_32563.1	302	1e-107	11 - 302	91	267 / 292	CUST_7897_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC26749 ABC32758 ABC53022
MLOC_71603.1	698	5e-107	296 - 698	84	339 / 403	None	ABC00006 ABC00194 ABC00425 ABC00433 ABC00606 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926
MLOC_945.2	911	4e-73	180 - 396	90	195 / 217	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_42878.1	376	1e-72	137 - 373	88	208 / 237	None	ABC00006 ABC00432 ABC00617 ABC00837 ABC53022
MLOC_67011.1	1952	5e-72	1726 - 1948	89	198 / 223	CUST_37480_PI390587928 CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00951 ABC00981 ABC26749 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_4849.2	933	3e-59	110 - 323	86	187 / 217	None	ABC00006 ABC00422 ABC00425 ABC00828 ABC00837 ABC00981 ABC26767 ABC26824 ABC26853 ABC53022