barSeed - Barley Seed Development Database

Probe ABC53013

Source Contig ABC53013

barSeed

Links

Affymetrix Source Sequence (1030 bp)

>ABC53013 1030
AGGATACCAATTATGGAAAACATAAGCTATATTCCAACACCGATTTGAACCACAATCCGG
ATACGAAATACGATCGATGATACCTATTCGATGACCAAATCCCGATTAGATCGGCTATTA
CGGACGCCGTTGGGTCTGTATTACTAGCATGGTTACGTACCTACCTTGAGTTAAGGGCGA
ATGGCCGCCGCGACCATGGCTCTGTCTTCCTCCACCTTCGCCGGGAAGGCGGTGAAAAAC
CTGTCTTCCTCGTCAGAGGTGCAGGGCGACGCCAGAGTCTCAATGAGGAAGACCGCCGCC
ACCAAGAAGGTCGGCAGCCCCTGGTACGGCCCGGACCGGGTCAAGTACCTGGGCCCCTTT
AGCGGGGAGTCCCCGTCCTACCTGACCGGCGAGTTCCCCGGAGACTACGGGTGGGACACG
GCCGGGCTCAGCGCCGACCCCGAGACCTTCGCCAAGAACCGCGAGCTGGAGGTGATCCAC
GGGCGCTGGGCGATGCTGGGGGCGCTCGGGTGCGTCTTCCCGGAGCTCCTCGCCCGGAAC
GGCGTCAAGTTTGGCGAGGCCGTGTGGTTCAAGAAGGGTTCCCAGATCTTTAGCGAGGGC
GGGCTGCAGTACCTGGGGAACCCCTCCCTGGTCCACGCGCAGAGCATCCTGGCCATCTGG
GCCTGCCAGGTGGTCCTCATGGGTGCCGTCGAAGGCTACCGCGTGGCCGGCGGTCCCCTG
GGCGAGGTGGTGGACCCCCTGTACCCCGGCGGCAGCTTTGACCCCCTCGGGCTCGCGGAC
GACGCGGAAGCCTTCGCCGAGCTGAAGGTCAAGGAGATCAAGAACGGACGCCTGGCCATG
TTCTCCATGTTCGGATTCTTCGTGCAGGCCATCGTCACCGGGAAGGGGCCCCTCGAGAAC
TTGGCGGACCATCTCGCCGACCCCGTAAACAACAATGCCTGGGCCTTCGCCACCAACTTC
GTCCCCGGCAAGTAAAATCGGCACCCCTTGCCAAAATTGCTCGCCATGCACATTCCTTCA
TTAATTAATA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK250272.1	1007	2e-170	201 - 864	83	553 / 666	CUST_13352_PI390587928 CUST_5030_PI390587928	ABC00006 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_945.1	1383	1e-168	267 - 930	83	552 / 666	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_945.2	911	5e-72	390 - 732	81	280 / 345	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013