barSeed - Barley Seed Development Database

Probe ABC00433

Source Contig ABC00433

barSeed

Links

Affymetrix Source Sequence (900 bp)

>ABC00433 900
CAGCTCCTTTAGAACCCATAGAGCGGACACTTTTCTTAGCTTTCCAATGGCGGCAGCCAC
CATGTCCCTCTCCTCCTCGACCTTTGCCGGCAAGGCGGTGAAGAACGTACCATCTTTGGC
TCTCTTTGGCGAGGCCCGAGTCACCATGCGCAAGACCGCAGCAAAGGCAAAGCAGGTTTC
CTCCGGTAGCCCATGGTACGGTGCTGACCGTGTGCTCTACCTCGGCCCACTCTCCGGTGA
GCCCCCGAGCTACCTCACTGGCGAGTTCCCTGGCGACTATGGTTGGGACACTGCCGGACT
TTCAGCTGACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATCCATTGCCGCTG
GGCTATGCTCGGGGCACTTGGTTGTGTCTTCCCTGAGTTGCTCGCCCGCAATGGCGTCAA
CTTCGGTGAGGTTGTTTGGTTCAAGGCTGGCTCCCAAATCTTTAGTAAAGGTGGTCTTGA
CTACCTTGGCAACCCAAGCCTCGTCCACGCGCAAAGCATCCTAGCTATCTGGGCATGCCA
GGTGGTGCTCATGGGTGCCGTCGAGGGGTACCGCATTGCCGGCAGCCCACTCGGTGAGAT
CGTGGACCCACTCTACCCAGGCGGCAGCTTCGACCCTCTTGGCCTGGCTGAAGACCCCGA
GGCATTCGCCGAGCTTAAGGTAAAGGAGATCAAGAACGGTCGCCTCGCCATGTTCTCAAT
GTTTGGCCTCTTTGTCCAAGCTATCGTCACGGGCAAGGGCCCACTCGAGAACCTCGCTGA
CCACATCGCCGACCCCGTCAACAACAATGCATGGGCGTTCGCCACCAACTTTGTCCCCGG
CAAGTAAGGTGTCTTGAGACTATGCCCACCATGAGGCGTGGTGTCCTGTGGTCTGAGTTG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_72290.1	1432	0.0	252 - 1148	96	859 / 897	CUST_10630_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC48253 ABC53022
AK248556.1	1012	0.0	43 - 937	95	846 / 895	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK248909.1	977	0.0	23 - 916	94	841 / 897	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_7198.1	839	0.0	198 - 839	99	636 / 642	None	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC25177
MLOC_58758.2	1185	0.0	108 - 926	91	749 / 819	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_58758.3	982	0.0	107 - 925	91	749 / 819	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
AK252077.1	1014	0.0	53 - 871	91	745 / 819	CUST_2914_PI390587928	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_29257.1	953	0.0	250 - 953	94	663 / 704	None	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012
AK356022	968	0.0	19 - 913	88	790 / 896	None	ABC00006 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC25177 ABC53022
MLOC_58758.4	1225	0.0	200 - 1094	88	786 / 896	CUST_38589_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00949 ABC01012 ABC25177 ABC32758 ABC53022
AK248894.1	957	0.0	5 - 850	88	747 / 846	CUST_35629_PI390587928	ABC00006 ABC00347 ABC00433 ABC00628 ABC00837 ABC00841 ABC00949 ABC00960 ABC25177 ABC26749 ABC26767 ABC32758 ABC53022
AK358669	1024	0.0	44 - 869	87	717 / 826	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00841 ABC00926 ABC26749 ABC32758 ABC53022
AK370975	1122	0.0	45 - 866	86	711 / 822	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
MLOC_78528.2	1256	0.0	206 - 1026	86	710 / 821	CUST_7895_PI390587928	ABC00006 ABC00194 ABC00418 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC48253
MLOC_56051.1	1187	0.0	330 - 1134	87	698 / 805	CUST_7905_PI390587928	ABC00006 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00949 ABC00951 ABC26767
AK253131.1	1012	0.0	74 - 895	86	709 / 822	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
AK250272.1	1007	0.0	63 - 869	87	699 / 808	CUST_13352_PI390587928 CUST_5030_PI390587928	ABC00006 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_73205.1	1276	0.0	320 - 1136	86	705 / 817	CUST_13384_PI390587928	ABC00006 ABC00194 ABC00418 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC46820 ABC48253
MLOC_945.1	1383	0.0	262 - 1068	86	698 / 808	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
AK252089.1	1119	0.0	212 - 1028	86	702 / 817	CUST_13384_PI390587928	ABC00006 ABC00189 ABC00194 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC09102 ABC46820 ABC48253
MLOC_41838.1	787	0.0	209 - 786	93	540 / 578	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_56052.1	1307	0.0	376 - 1190	86	697 / 815	CUST_35771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00949 ABC00951 ABC00981 ABC26749 ABC31752 ABC53022
MLOC_81109.1	1237	0.0	283 - 1086	85	684 / 804	CUST_35720_PI390587928	ABC00006 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00828 ABC00837 ABC00926 ABC00944 ABC00981 ABC01012 ABC26767 ABC53022
MLOC_44067.1	1132	0.0	132 - 935	85	680 / 804	CUST_13391_PI390587928	ABC00006 ABC00194 ABC00422 ABC00425 ABC00433 ABC00828 ABC00926 ABC00949 ABC00981 ABC01012 ABC26767 ABC53022
AK250765.1	1054	0.0	80 - 883	84	674 / 804	None	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00433 ABC00606 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
MLOC_69498.1	1386	0.0	371 - 1071	85	601 / 707	CUST_35738_PI390587928	ABC00006 ABC00189 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC25177 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC53022
MLOC_58758.1	943	2e-81	212 - 421	93	195 / 210	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758
MLOC_48202.1	675	4e-172	268 - 672	94	382 / 408	None	ABC00006 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00949
MLOC_9033.1	1159	1e-146	703 - 1156	87	397 / 454	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC26749 ABC26767 ABC32758 ABC53022
MLOC_78528.1	881	3e-128	206 - 593	88	342 / 388	CUST_7895_PI390587928	ABC00006 ABC00194 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC48253
MLOC_22471.1	923	1e-126	261 - 887	80	502 / 629	CUST_16534_PI390587928 CUST_35749_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_22471.2	1220	1e-126	158 - 784	80	502 / 629	CUST_16534_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
AK356138	877	7e-125	145 - 771	80	501 / 629	None	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
AK248335.1	1078	7e-125	241 - 867	80	501 / 629	CUST_35749_PI390587928	ABC00189 ABC00194 ABC00432 ABC00433 ABC00617 ABC00628 ABC00926 ABC00951 ABC39551 ABC53022
MLOC_54581.1	1145	1e-117	1 - 269	95	256 / 269	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00951 ABC00960 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_32563.1	302	4e-107	80 - 302	98	219 / 223	CUST_7897_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC26749 ABC32758 ABC53022
MLOC_71603.1	698	2e-100	272 - 689	83	345 / 418	None	ABC00006 ABC00194 ABC00425 ABC00433 ABC00606 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926
MLOC_945.2	911	2e-71	187 - 396	90	189 / 210	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013