barSeed - Barley Seed Development Database

Probe ABC00841

Source Contig ABC00841

barSeed

Links

Affymetrix Source Sequence (967 bp)

>ABC00841 967
CTTGAGAACCCATACAGCGGAGACTTCGCTTAGCTTTCCATGGCGGCAGCCACCATGTCC
ATCTCCTCCTCGACCTTTGCCGGCAAGGCGGTGAAGAATGTACCATCTTTGGCTCTCTTT
GGAGAGGCCCGAGTCACCATGCGCAAGACCGCAGCAAAGGCGAAGCAGGTTTCCTCCGGC
AGCCCATGGTACGGTGCTGACCGTGTGCTCTACCTCGGCCCACTCTCCGGTGAGCCCCCG
AGCTACCTCACTGGTGAGTTCCCTGGCGACTATGGGTGGGACACTGCCGGACTTTCAGCT
GACCCTGAGACCTTTGCCAAGAACCGGGAGCTGGAGGTGATCCATTGCCGATGGGCCATG
CTCGGGGCACTTGGTTGTGTCTTTCCTGAGTTGCTCGCCCGCAACGGCGTCAAGTTCGGT
GAGGCTGTTTGGTTCAAGGCCGGCTCCCAGATCTTTAGTGAGGGTGGTCTCGACTACCTT
GGCAACCCAAGCCTCGTCCACGCCCAAAGTATCCTAGCTATTTGGGCATGTCAGGTCGTG
CTCATGGGCGCCGTCGAGGGGTACCGCATTGCAGGCGGCCCACTCGGTGAGATCATCGAC
CCACTCTACCCAGGTGGCAGCTTCGACCCTCTTGGCCTGGCTGAAGACCCTGAGGCATTC
GCCGAGCTCAAGGTGAAGGAGATCAAGAATGGTCGCCTCGCCATGTTCTCAATGTTTGGC
TTCTTTGTCCAAGCCATCGTCACGGGCAAGGGCCCACTCGAGAACCTCGCTGACCACATC
GCCGACCCCGTCAACAACAATGCATGGGCCTTCGCCACCAACTTTGTCCCCGGCAAGTAA
GGTGTCTTGGGACTGTGCTCACCATGAGGCGTGTTTTCTTGTGGTCTGAGTTGTACTACC
ATGATGTAAATTACGAGAGTTTTGTGCAAAATAATGGTTTGATTTGTCCAAAAAAAAAAA
AAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248556.1	1012	0.0	45 - 1009	99	962 / 965	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_72290.1	1432	0.0	255 - 1205	96	912 / 951	CUST_10630_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC48253 ABC53022
AK248909.1	977	0.0	26 - 971	95	905 / 949	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_29257.1	953	0.0	252 - 953	99	696 / 702	None	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012
MLOC_58758.2	1185	0.0	19 - 954	89	839 / 940	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
MLOC_58758.3	982	0.0	18 - 953	89	839 / 940	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
AK356022	968	0.0	21 - 968	89	842 / 950	None	ABC00006 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC25177 ABC53022
MLOC_58758.4	1225	0.0	143 - 1092	88	841 / 951	CUST_38589_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00949 ABC01012 ABC25177 ABC32758 ABC53022
AK252077.1	1014	0.0	25 - 975	88	840 / 955	CUST_2914_PI390587928	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00960 ABC25177 ABC32758 ABC48253 ABC53022
AK248894.1	957	0.0	5 - 932	88	819 / 930	CUST_35629_PI390587928	ABC00006 ABC00347 ABC00433 ABC00628 ABC00837 ABC00841 ABC00949 ABC00960 ABC25177 ABC26749 ABC26767 ABC32758 ABC53022
MLOC_41838.1	787	0.0	154 - 786	96	606 / 633	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_7198.1	839	0.0	201 - 839	95	605 / 639	None	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC25177
AK253131.1	1012	0.0	56 - 1009	85	817 / 960	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
MLOC_73205.1	1276	0.0	322 - 1228	86	784 / 913	CUST_13384_PI390587928	ABC00006 ABC00194 ABC00418 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC46820 ABC48253
AK370975	1122	0.0	27 - 965	85	804 / 945	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
AK252089.1	1119	0.0	214 - 1116	86	780 / 909	CUST_13384_PI390587928	ABC00006 ABC00189 ABC00194 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC09102 ABC46820 ABC48253
AK250272.1	1007	0.0	64 - 948	86	763 / 887	CUST_13352_PI390587928 CUST_5030_PI390587928	ABC00006 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_945.1	1383	0.0	182 - 1067	86	762 / 887	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
AK358669	1024	0.0	45 - 933	86	763 / 891	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00841 ABC00926 ABC26749 ABC32758 ABC53022
MLOC_78528.2	1256	0.0	133 - 1025	85	761 / 893	CUST_7895_PI390587928	ABC00006 ABC00194 ABC00418 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC48253
MLOC_56052.1	1307	0.0	376 - 1177	87	694 / 802	CUST_35771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00949 ABC00951 ABC00981 ABC26749 ABC31752 ABC53022
MLOC_56051.1	1187	0.0	330 - 1132	86	692 / 803	CUST_7905_PI390587928	ABC00006 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00949 ABC00951 ABC26767
AK250765.1	1054	0.0	104 - 883	86	670 / 780	None	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00433 ABC00606 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
AK372776	1096	0.0	157 - 878	86	622 / 722	CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00981 ABC01012 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_69498.1	1386	0.0	371 - 1071	86	610 / 707	CUST_35738_PI390587928	ABC00006 ABC00189 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC25177 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC53022
MLOC_58758.1	943	8e-95	123 - 421	88	265 / 301	None	ABC00006 ABC00347 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC32758
MLOC_48202.1	675	9e-179	271 - 675	95	386 / 408	None	ABC00006 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00949
MLOC_54581.1	1145	5e-171	1 - 326	100	326 / 326	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00951 ABC00960 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_9033.1	1159	7e-160	639 - 1156	86	449 / 520	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC26749 ABC26767 ABC32758 ABC53022
MLOC_945.2	911	5e-77	107 - 396	85	247 / 290	None	ABC00006 ABC00189 ABC00194 ABC00418 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC32758 ABC48253 ABC53013
MLOC_67012.1	762	9e-139	349 - 757	89	362 / 409	CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC00981 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_44927.1	838	4e-137	412 - 838	87	373 / 427	CUST_13341_PI390587928	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
MLOC_44068.1	650	2e-135	193 - 650	86	393 / 458	None	ABC00189 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00841 ABC00926 ABC53022
MLOC_78528.1	881	9e-134	133 - 596	85	396 / 464	CUST_7895_PI390587928	ABC00006 ABC00194 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012 ABC48253
MLOC_71603.1	698	5e-112	296 - 698	85	342 / 403	None	ABC00006 ABC00194 ABC00425 ABC00433 ABC00606 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926
MLOC_32563.1	302	8e-105	19 - 302	92	260 / 284	CUST_7897_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC26749 ABC32758 ABC53022
MLOC_67011.1	1952	5e-77	1726 - 1948	90	201 / 223	CUST_37480_PI390587928 CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00951 ABC00981 ABC26749 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_35646.1	260	1e-73	3 - 255	87	219 / 253	None	ABC00194 ABC00418 ABC00628 ABC00841 ABC00926 ABC00944 ABC00949 ABC01012