barSeed - Barley Seed Development Database

Probe ABC00606

Source Contig ABC00606

barSeed

Links

Affymetrix Source Sequence (691 bp)

>ABC00606 691
CTTGCGCATGGTGACGCGCGCATCCCGGAAAAGCGCCGACGACGGCAGGTCATTGACCGC
ATTCCCGGCGAAGGACGAGGAGGAGAGCGCCATCGCGGTGGTCGCCATTGCTTCAAGGAG
ACTCGTGCGTGTCCGGTGTGCGTGCTCGATAACAGTGGGGCTGTGGTGGACGCCGACAAG
CCCAACTACGTGCGCTACCACGAGCAGCTGCTGCGGCTGGTGCGCGTCGGCGGCACCATC
ATCTACGACAACACGCTCTGGGGCGGCACGGTGGCGCTGCCGGCGGGCACGCCCTTGTCC
GACCTCGACACCCGCTTTTCCGCCGCCCTCAGGGACCTCAACGCCAAGCTCGCCGCCGAC
CCGCGCATCGAGGTCTGCCAGCTCGCCATCGCCGACGGCGTCACCATCTGCCGCCGCGTC
GTCTAGACGGGCGTCCGGTCAGGTCCGGCGTGAAGCATCGGGATCCGCCGTGCGTGGAGT
CGATTTCGTTCCTTACCAGCCGCTTCCCTTAATCAATTGTATTATTTTTCCCTGCCAGCG
CTGGCTAGCGTGAAGCATCTGATGGTTTCGAGTTTTCCAATAATACTTTTTTGCTTTCGA
AATTTGATGAGAGGAGAGGGAGGAGTGGTTCTACTTATGTACTGTACTCTTAAACTAAAT
ATGGTGTTGCAATGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_70730.1	1222	0.0	743 - 1222	99	479 / 481	CUST_411_PI415269222	ABC00406 ABC00606
AK250765.1	1054	2e-75	21 - 189	97	164 / 169	None	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00433 ABC00606 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
MLOC_71603.1	698	2e-75	213 - 381	97	164 / 169	None	ABC00006 ABC00194 ABC00425 ABC00433 ABC00606 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926