barSeed - Barley Seed Development Database

Probe ABC26749

Source Contig ABC26749

barSeed

Links

Affymetrix Source Sequence (353 bp)

>ABC26749 353
GGGCGGAAGCTTTGACCCACTCGGTCTGGCCGATGACCCTGAAGCATTCGCCGAGCTCAA
GGTGAAGGAGATCAAGAACGGCCGCCTTGCCATGTTCTCGATGTTTGGCTTCTTTGTCCA
GGCCATAGTCACCGGCAAGGGTCCTCTTGAGAACCTCGCTGACCACATCGCCGACCCCGT
CAACAGCAACGCTTGGGCATTTGCCACAAACTTCGTCCCCGGCAAATAAGGTGTCCCGGA
GCTAGTCATGTTGAAGTGTGAGGTTGTGTGGTTTGATTTGTACTACCATGATGTAAATTA
TGAGAATTCTATGGAGAAGCATTGTTAGATTTGACCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK253131.1	1012	1e-172	658 - 1009	98	344 / 352	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
AK370975	1122	1e-167	629 - 965	98	331 / 337	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00949 ABC00951 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC53022
AK358669	1024	9e-130	629 - 966	92	310 / 338	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00841 ABC00926 ABC26749 ABC32758 ABC53022
MLOC_9033.1	1159	9e-130	606 - 943	92	310 / 338	CUST_13360_PI390587928 CUST_7894_PI390587928	ABC00189 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC26749 ABC26767 ABC32758 ABC53022
AK248556.1	1012	4e-89	663 - 1009	84	291 / 347	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_49099.1	311	3e-85	1 - 174	99	173 / 174	CUST_38623_PI390587928 CUST_2883_PI390587928	ABC00432 ABC00617 ABC26749 ABC53022
MLOC_72290.1	1432	1e-84	874 - 1176	85	259 / 303	CUST_10630_PI390587928	ABC00006 ABC00189 ABC00194 ABC00347 ABC00418 ABC00422 ABC00432 ABC00433 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC26767 ABC31752 ABC32758 ABC48253 ABC53022
MLOC_54581.1	1145	8e-81	1 - 326	83	272 / 326	CUST_35730_PI390587928	ABC00006 ABC00194 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00951 ABC00960 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
AK248909.1	977	3e-80	642 - 969	83	274 / 329	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_41838.1	787	1e-78	156 - 483	83	273 / 329	CUST_9771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00960 ABC01012 ABC25177 ABC26749 ABC31752 ABC32758 ABC53022
MLOC_56052.1	1307	8e-76	376 - 598	90	200 / 223	CUST_35771_PI390587928	ABC00006 ABC00194 ABC00347 ABC00418 ABC00422 ABC00425 ABC00432 ABC00433 ABC00617 ABC00628 ABC00828 ABC00841 ABC00949 ABC00951 ABC00981 ABC26749 ABC31752 ABC53022
AK372776	1096	2e-71	653 - 876	88	198 / 224	CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00418 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00949 ABC00951 ABC00981 ABC01012 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
AK248894.1	957	2e-71	619 - 946	82	268 / 328	CUST_35629_PI390587928	ABC00006 ABC00347 ABC00433 ABC00628 ABC00837 ABC00841 ABC00949 ABC00960 ABC25177 ABC26749 ABC26767 ABC32758 ABC53022
MLOC_67011.1	1952	2e-71	1728 - 1951	88	198 / 224	CUST_37480_PI390587928 CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00951 ABC00981 ABC26749 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
MLOC_67012.1	762	2e-71	351 - 574	88	198 / 224	CUST_26084_PI390587928 CUST_5616_PI390587928 CUST_35770_PI390587928	ABC00006 ABC00074 ABC00189 ABC00194 ABC00422 ABC00432 ABC00617 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC00981 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC49782 ABC53022
AK250765.1	1054	2e-62	661 - 883	86	192 / 223	None	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00433 ABC00606 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00926 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
MLOC_44927.1	838	2e-62	412 - 634	86	192 / 223	CUST_13341_PI390587928	ABC00006 ABC00189 ABC00194 ABC00422 ABC00425 ABC00620 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC26749 ABC26767 ABC31752 ABC32758
MLOC_69498.1	1386	6e-57	371 - 592	85	188 / 222	CUST_35738_PI390587928	ABC00006 ABC00189 ABC00194 ABC00418 ABC00422 ABC00425 ABC00433 ABC00628 ABC00828 ABC00837 ABC00841 ABC00944 ABC00951 ABC25177 ABC26749 ABC26767 ABC26853 ABC31752 ABC32758 ABC53022
MLOC_32563.1	302	1e-54	43 - 302	82	215 / 261	CUST_7897_PI390587928	ABC00006 ABC00347 ABC00432 ABC00433 ABC00628 ABC00837 ABC00841 ABC00926 ABC00944 ABC00960 ABC25177 ABC26749 ABC32758 ABC53022