barSeed - Barley Seed Development Database

Probe ABC00648

Source Contig ABC00648

barSeed

Links

Affymetrix Source Sequence (951 bp)

>ABC00648 951
CCACAGCTCACCAACCCTCTCGCCGGAGTCTAGCGAAGCAAGCAAGCAAGCCAGGAAGAT
GGACGGCAGCAAGGCGAAGAAGGTGGCGGCGAAGAAGCTGGGCGGGCCGAGGAAGAAGTC
GGTGACCAAGTCCATCAAGGCCGGCCTCCAGTTCCCCGTCGGCCGCATCGGCCGCTACCT
CAAGAAGGGCCGCTACGCCCAGCGCGTCGGCTCCGGCGCCCCCGTCTACCTCGCCGCCGT
CCTCGAGTACCTCGCAGCCGAGGCAAGCCCCGCGACGCCGTCTTTCTCCCTTCCCTAGCT
CTCTTCCGACGAACCACCGCCCTTCTCTCCCTCTCTTTCTTCCGACGTAGCTTTCTCCCC
GGTCTGAAACAAGCTGACGATCTTGTTTTGCAGGTGCTGGAGCTGGCCGGCAACGCGGCC
AAGGACAACAAGAAGACCCGCATCGTGCCGAGGCACCTGCTGCTGGCCATCCGCAACGAC
CAGGAGCTCGGGAGGCTGCTCTCCGGCGTCACCATCGCCCACGGCGGCGTCATCCCCAAC
ATCAACCCGGTGCTGCTCCCCAAGAAGTCCGCCGAGAAGGCCGAGAAGACCGAGAAGGCC
GGCGCCGGCGCCAAGTCGCCCAAGAAGGCCGCCAAGTCCCCCAAGAAGGCTCCCAAGAAG
GCCACCAAGGCCTAGATCCGGGCGGGCGGAGCGGCCGCGCAGACGAAGCTGAACTGACGA
TGCTCCGTCGGCCCTCGCGTGCCTAGCGTCCCTGTTAAGTTAGCTATGTTATTATGGTGT
GTTCCCAGGGAGTGTTAAAGCTTGCACTTTTGCTTTGCCCCCGCCATGTAATCCTGAACG
AAGAGGAAACCTCTGGCTTCCTCTGTTCCTATGAACCAATCTGGTATCCAATGCAGCGCT
TGCTAAAACGCCGCTGAGTGTCTGTTCTCAGTTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_33483.1	1189	0.0	483 - 1189	99	701 / 707	CUST_1269_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869
AK252601.1	938	1e-132	27 - 289	99	261 / 263	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
MLOC_33483.3	512	0.0	1 - 481	99	479 / 481	None	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
MLOC_33483.2	607	6e-116	1 - 227	100	227 / 227	CUST_1269_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869
AK250581.1	781	4e-107	34 - 286	95	241 / 254	CUST_39452_PI390587928 CUST_39507_PI390587928 CUST_21691_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
MLOC_81367.1	756	4e-107	287 - 643	86	334 / 387	CUST_39452_PI390587928 CUST_39507_PI390587928 CUST_21691_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208
MLOC_81367.2	510	6e-106	130 - 484	86	332 / 385	CUST_39452_PI390587928 CUST_21691_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
MLOC_81367.3	292	1e-102	12 - 270	93	248 / 268	None	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
MLOC_19904.1	278	4e-93	14 - 241	94	216 / 229	None	ABC00085 ABC00096 ABC00648 ABC00869
MLOC_20478.1	198	2e-76	29 - 198	98	166 / 170	None	ABC00096 ABC00648
AK252060.1	846	6e-61	123 - 277	94	146 / 155	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.1	1710	2e-71	1406 - 1612	90	187 / 207	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.3	1144	2e-71	840 - 1046	90	187 / 207	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.2	1688	2e-71	1384 - 1590	90	187 / 207	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_32445.1	261	3e-69	73 - 257	92	171 / 185	CUST_14106_PI390587928	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00869 ABC34584
AK376310	633	4e-68	228 - 407	93	167 / 180	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK374121	736	6e-61	101 - 264	93	153 / 165	CUST_33969_PI390587928 CUST_39472_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC42929
MLOC_29188.1	718	5e-67	131 - 329	90	179 / 199	CUST_39525_PI390587928 CUST_25890_PI390587928	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00239 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00869 ABC34584
AK369442	685	5e-62	65 - 218	95	146 / 154	CUST_39489_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC34584 ABC44597
AK251852.1	741	1e-58	97 - 279	89	166 / 186	CUST_39512_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK252540.1	738	1e-57	94 - 257	92	151 / 165	CUST_39525_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00239 ABC00286 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_55495.1	662	6e-66	228 - 418	91	173 / 191	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_29188.3	531	6e-66	22 - 218	90	177 / 197	CUST_25890_PI390587928 CUST_39525_PI390587928	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00239 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00869 ABC34584
MLOC_29188.2	487	6e-66	41 - 237	90	177 / 197	None	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00239 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00869 ABC34584
AK366376	1562	1e-62	65 - 256	89	177 / 198	CUST_39473_PI390587928 CUST_35203_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK251633.1	761	1e-62	68 - 259	89	177 / 198	CUST_39473_PI390587928 CUST_35203_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK251986.1	744	5e-62	73 - 226	95	146 / 154	CUST_39515_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK248534.1	712	2e-61	74 - 266	89	177 / 199	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_35005.1	648	1e-63	354 - 552	89	177 / 199	CUST_39476_PI390587928	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00869 ABC34584
AK373742	770	2e-61	72 - 264	89	177 / 199	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK250752.1	723	2e-61	270 - 449	91	163 / 180	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK374191	752	5e-57	79 - 261	89	165 / 186	CUST_39476_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
MLOC_24886.1	550	2e-61	305 - 484	91	163 / 180	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_50368.1	374	6e-61	95 - 258	93	153 / 165	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259
AK369538	691	3e-59	304 - 488	89	165 / 185	CUST_35181_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00443 ABC00571 ABC00648 ABC00656 ABC00709 ABC00869 ABC17259
MLOC_42724.1	265	3e-59	99 - 265	92	153 / 167	None	ABC00085 ABC00137 ABC00145 ABC00158 ABC00167 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00869
MLOC_23198.1	524	3e-59	248 - 428	90	163 / 181	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584
AK365600	715	4e-53	154 - 315	90	146 / 162	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_23606.1	451	5e-57	99 - 252	93	143 / 154	None	ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869
AK373523	676	8e-55	146 - 307	91	147 / 162	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
AK368087	892	1e-53	89 - 266	88	159 / 180	CUST_39478_PI390587928	ABC00054 ABC00085 ABC00137 ABC00145 ABC00167 ABC00188 ABC00427 ABC00440 ABC00443 ABC00648 ABC00709 ABC47465
MLOC_43244.1	861	1e-53	325 - 508	88	161 / 184	CUST_7984_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_68568.2	976	4e-53	158 - 319	90	146 / 162	CUST_39524_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00494 ABC00648 ABC00709 ABC00869
MLOC_68568.1	689	4e-53	159 - 320	90	146 / 162	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00494 ABC00648 ABC00709 ABC00869
MLOC_42937.1	386	4e-53	152 - 313	90	146 / 162	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
AK248367.1	737	2e-51	141 - 293	91	139 / 153	CUST_39486_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313