barSeed - Barley Seed Development Database

Probe ABC00656

Source Contig ABC00656

barSeed

Links

Affymetrix Source Sequence (672 bp)

>ABC00656 672
GAACACACTTACACACTCCCGCCAACGCAACGCGCTCCCGCCTCCCCAAATCCAATCCCC
ATCGGCCATCGCCAAATCTCTCCGCGCCTCCAACACCATGGAAGCCTCAGGCGCCGGCGC
CGGCGCCATCCCGAGGGCGAAGAGGTACGTGGTGGGGCGCAAGCTCGGCGGCAGCCCCAG
GAAGAAGATGGTGGCGCGGTCCGTCAAGGCCGGGCTGCAGTTCCCCGTCGCCCGCATCGG
GCGCTTCCTCAAGAAGGGCCGGTACGCGCAGCGCGTCGGCCGGGGCGCCCCCGTCTACCT
CGCCTCCGTCCTCGAGTACCTCGCCGCCGAGATCCTGGAGCTCGCCGGGAACGCCGCCAA
GGACAACAAAAAGTCCCGCATCATGCCGCGCCACCTGCTGCTCGCCATCCGGAACGACCC
GGAGCTTGGAAAGCTGCTCGCCGGCGTCACCATCGCCCACGGCGGCGTGCTGCCCAACAT
CAACCCCGTGCTTCTCCCCAAGAAGATGGTCGAGAAGGAGCCCAAGTCGCCCAACAAGGC
CGCCAAGTTCCCCAAGAAGGCTTAGTCGATTACTGCCTAGTACTCTACTTCGTAATAGAA
TTAGTGTTCGTTGTTCTGGTAATGGTGTCGATCTAGTAATGCTCTGTCCTGCTTTGAAAA
AAAAAATGAATG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_43244.1	861	0.0	179 - 840	96	645 / 671	CUST_7984_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_65183.1	1053	0.0	297 - 842	89	489 / 551	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00443 ABC00494 ABC00571 ABC00656 ABC00709 ABC17259
MLOC_65183.2	490	2e-154	1 - 456	88	407 / 461	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00443 ABC00494 ABC00571 ABC00656 ABC00709 ABC17259
AK252060.1	846	1e-125	124 - 463	91	308 / 340	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK365600	715	2e-124	91 - 554	84	399 / 473	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
AK374797	691	9e-123	130 - 542	86	359 / 416	CUST_39511_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK373523	676	4e-121	134 - 546	86	358 / 416	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
AK369538	691	5e-120	129 - 545	86	360 / 420	CUST_35181_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00443 ABC00571 ABC00648 ABC00656 ABC00709 ABC00869 ABC17259
AK251852.1	741	2e-118	127 - 453	90	295 / 327	CUST_39512_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK374121	736	3e-117	110 - 437	90	295 / 328	CUST_39472_PI390587928 CUST_33969_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC42929
MLOC_55495.1	662	3e-117	230 - 569	89	303 / 340	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK376310	633	1e-116	74 - 400	90	295 / 328	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK248367.1	737	2e-114	120 - 532	85	354 / 416	CUST_39486_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
AK366376	1562	3e-112	103 - 430	89	292 / 328	CUST_35203_PI390587928 CUST_39473_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK251633.1	761	3e-112	106 - 433	89	292 / 328	CUST_39473_PI390587928 CUST_35203_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK374191	752	1e-111	109 - 435	89	291 / 327	CUST_39476_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK250581.1	781	4e-111	118 - 472	87	312 / 358	CUST_39452_PI390587928 CUST_21691_PI390587928 CUST_39507_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
AK248534.1	712	1e-110	112 - 439	89	291 / 328	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK250752.1	723	7e-109	115 - 442	88	290 / 328	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_24886.1	550	7e-109	150 - 477	88	290 / 328	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_38467.1	1710	9e-108	1424 - 1710	91	262 / 287	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.3	1144	9e-108	858 - 1144	91	262 / 287	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.2	1688	9e-108	1402 - 1688	91	262 / 287	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK373742	770	3e-107	114 - 438	88	287 / 325	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK252601.1	938	9e-103	121 - 475	86	307 / 358	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
AK371572	872	2e-94	339 - 694	84	300 / 356	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
MLOC_25652.1	512	9e-93	150 - 505	84	299 / 356	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259
MLOC_40625.1	370	5e-80	1 - 239	89	216 / 242	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_42937.1	386	1e-76	140 - 384	88	220 / 250	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_81367.2	510	4e-66	309 - 508	90	179 / 200	CUST_21691_PI390587928 CUST_39452_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
MLOC_33483.3	512	7e-64	293 - 512	87	191 / 220	None	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
MLOC_18705.1	455	9e-63	1 - 247	85	210 / 247	CUST_39511_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00167 ABC00188 ABC00412 ABC00414 ABC00656 ABC00709 ABC00869 ABC17259
MLOC_81367.3	292	9e-58	93 - 292	88	175 / 200	None	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
MLOC_32445.1	261	6e-55	80 - 250	89	153 / 171	CUST_14106_PI390587928	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00869 ABC34584
MLOC_81367.1	756	3e-53	466 - 636	89	152 / 171	CUST_39452_PI390587928 CUST_21691_PI390587928 CUST_39507_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208
MLOC_35005.1	648	9e-53	375 - 547	88	153 / 173	CUST_39476_PI390587928	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00869 ABC34584