barSeed - Barley Seed Development Database

Probe ABC34584

Source Contig ABC34584

barSeed

Links

Affymetrix Source Sequence (524 bp)

>ABC34584 524
GAAGACCCGCATCATCCCGCGCCACCTGCTGCTCGCCGTCCGCAACGACCAGGAGCTCGG
CAGGCTTCTCGCCGGCGTCACCATCGCCCACGGCGGTGTCATCCCCAACATCAACTCCGT
CCTGCTCCCCAAGAAGTCCCCCGCCGCCGCCGAGAAGGAGGCCAAGTCGCCCAAGAAGAA
GACGACCACCAAGTCCCCCAAGAAGAAGGCCCCCGCCGCCAAGGAGTAGCCGCCCGCACC
CATAGCCTAGCCTGTGTTGCTTCGTTCCATTTCTCATGGACAAGATGAGCAGTCTTTTGG
TTAGTTAGATGAGCAGTGCTTCTGTTCTTAGATTGGCGCAGCAAGGGTTACATTGTGTCT
GTGATATCTGTAGGGATGGCTAAATATGCAATCGTTCAGATCTGAATTCTCCTGTTCTAT
CTGCGGTTGCAATTGATCATCTGAATATATTGCTACCTGCGCTGTTTTTGTACTGAATTC
TCACTTCTGCCATCTGAAAATTTCCCCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373742	770	0.0	303 - 770	99	461 / 468	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
MLOC_23198.1	524	0.0	1 - 393	99	388 / 393	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584
AK250752.1	723	0.0	307 - 702	97	383 / 396	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK366376	1562	1e-114	295 - 580	93	269 / 290	CUST_39473_PI390587928 CUST_35203_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK251633.1	761	1e-114	298 - 583	93	269 / 290	CUST_35203_PI390587928 CUST_39473_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK248534.1	712	1e-114	304 - 595	92	270 / 292	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK251986.1	744	2e-102	265 - 565	89	269 / 301	CUST_39515_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK251852.1	741	2e-102	318 - 613	90	269 / 300	CUST_39512_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
MLOC_37489.1	503	5e-99	243 - 503	92	240 / 261	CUST_39506_PI390587928 CUST_39513_PI390587928	ABC00085 ABC00137 ABC00145 ABC00158 ABC00167 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00869 ABC34584
AK252540.1	738	1e-94	295 - 575	89	256 / 288	CUST_39525_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00239 ABC00286 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC34584
AK376310	633	5e-94	265 - 499	94	220 / 235	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
MLOC_29188.1	718	7e-93	173 - 471	87	267 / 306	CUST_25890_PI390587928 CUST_39525_PI390587928	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00239 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00869 ABC34584
MLOC_29188.3	531	7e-93	62 - 360	87	267 / 306	CUST_39525_PI390587928 CUST_25890_PI390587928	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00239 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00869 ABC34584
MLOC_29188.2	487	7e-93	81 - 379	87	267 / 306	None	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00239 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00869 ABC34584
MLOC_24886.1	550	7e-93	342 - 550	96	201 / 209	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK374121	736	4e-90	302 - 532	93	217 / 234	CUST_39472_PI390587928 CUST_33969_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC42929
AK374191	752	7e-83	300 - 507	94	195 / 208	CUST_39476_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
MLOC_35005.1	648	7e-83	303 - 510	94	195 / 208	CUST_39476_PI390587928	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00869 ABC34584
AK369442	685	3e-81	256 - 469	93	198 / 214	CUST_39489_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC34584 ABC44597
MLOC_80406.1	180	7e-68	9 - 172	95	156 / 164	None	ABC00085 ABC00137 ABC00145 ABC00158 ABC00167 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00869 ABC34584
MLOC_32445.1	261	2e-63	115 - 261	97	142 / 147	CUST_14106_PI390587928	ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00869 ABC34584
MLOC_76592.1	169	7e-63	1 - 169	93	158 / 170	CUST_39514_PI390587928 CUST_39529_PI390587928	ABC00869 ABC34584