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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33969_PI390587928Hv_44K_v2GGACTGTATTTTACCTGTGATTTAGTATTTGATCAATGACTGAAGATGCCACACTTTCAA268GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1021.2471.1030.9710.5790.515
Raw 6897.35712696.6739419.55712719.8002705.6232649.793



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_7342.14362e-24107 - 16610060 / 60minus ABC00085 ABC00137 ABC00145 ABC00158 ABC00167 ABC00286 ABC00440 ABC00494 ABC00571 ABC00671 ABC42929
MLOCAK3741217367e-23651 - 7109859 / 60plus ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC42929
JLOC1JLOC1_4841.13828e-2553 - 11210060 / 60minus
Harvest21ABC429293473e-25269 - 32810060 / 60plusABC42929
Harvest21ABC000857133e-25639 - 69810060 / 60plusABC00085
Harvest21ABC481835646e-2220 - 799758 / 60minus
Harvest21ABC0049411676e-22630 - 6899758 / 60plusABC00494
Harvest35U35_447893473e-25269 - 32810060 / 60plus
Harvest35U35_139627646e-22650 - 7099758 / 60plus



Contig Sequence (347 bp)

>U35_44789 347 Hv_44K_v2
AGCACCCCGCCGCCAACGCCACACCTCGTGACCCCTCGTCGCCGGAGCAGCAGCAAGCAA
GATGGCCGCCGAGAAGGAGGCCACCAAGTCGCCCAAGAAGAAGACCGCTACCAAGTCCCC
CAAGAAGAAGGCCGCCGCCAAGGAGTAGCCTAGCTGACACTTAGTTCGGTATCAGGGAGA
AGATGAGCAGACTTTTGGTTGATTGGATCATGTATGTAAATGCCAGTGTGTATTTGCTCT
TTCATTTGTTCGATGAACAGGCCAGTCAGGACTGTATTTTACCTGTGATTTAGTATTTGA
TCAATGACTGAAGATGCCACACTTTCAATCAAAAAAAAAAAAAAAAA



Homology of Contig U35_44789 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None