barSeed - Barley Seed Development Database

Probe ABC00427

Source Contig ABC00427

barSeed

Links

Affymetrix Source Sequence (955 bp)

>ABC00427 955
GCACAAACGCACACTCCACCGCACAAAACAAGCCTAAAAAAAACCCCGAGGAAATCGACA
GGGAGAAAAGGGGGCGAAAAAAAGGAGAGCAAAGAGGAAAAGCTTCGGAGCTCTGGATCG
GCGATGGAGTCGGTAGCGAAGGCGCCGAAGAAGGCCGGCGCGGCCGGGCGCCGGGGCGGC
GGCGGGCCGAAGAAGAAGGCCGTCTCACGCTCCGTCAAGGCCGGCCTCCAGTTCCCCGTG
GGCCGCATCGGGCGCTACCTCAAGCAGGGCCGCTACGCCAAGCGCGTCGGCAGCGGCGCC
CCCGTCTACCTCGCCGCCGTCCTCGAGTACCTCGCCGCCGAGCTCCTGGAGCTGGCGGGG
AACGCGGCGCGGGACAACAAGAAGAACCGGATCATCCCGCGGCACGTGCTGCTCGCGATC
CGCAACGACCAGGAGCTCGGGAAGCTGCTGGCCGGCGTCACCATCGCCTACGGAGGTGTC
CTGCCCAACATCAACCCCGTGCTGCTTCCCAAGAAGCCCGCCGCGGCGGCTGCCAAGGAG
CCCAAGGCGGGCACCACCAAGTCTCCCAGGAAGTCCCCCGCCAAGAAGGCGGCCGCCGCT
TAGGCCCGGCACTCGCTATGCCGGTGCCCCATCTCACCCTCTCCTCCCTCTTCTCTGTTT
CTCTGTCTGTCTGGGTTGAACCGTAACGCACCAAGTTGTCGTCGTCGTCGTTGCTGCATG
CCGTCGTTGCCATGGATCGATTGCTGCTTGTTTGTACTTATTTTGCGTGGCTTCCGCATA
GGTGCCAATCAGCTTATACTCTGTAACCTGATTAACACCGCTGTATGTTCGTATAAGTTC
GTAGGTCAAGGGAGAGAGGGAGGGGAAGGGAAACTGTGAATGCCTCTTTGTAATAAAATT
GTGAAGATGTGAAAAAAAAAAAAAAACTGATTGTCGTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_33596.1	622	0.0	1 - 622	99	620 / 622	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00167 ABC00188 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597 ABC47465
AK368087	892	4e-127	4 - 250	100	247 / 247	CUST_39478_PI390587928	ABC00054 ABC00085 ABC00137 ABC00145 ABC00167 ABC00188 ABC00427 ABC00440 ABC00443 ABC00648 ABC00709 ABC47465
MLOC_22339.1	628	3e-168	1 - 321	100	321 / 321	None	ABC00427
AK250581.1	781	2e-115	124 - 466	89	305 / 344	CUST_39452_PI390587928 CUST_21691_PI390587928 CUST_39507_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
MLOC_55495.1	662	7e-115	213 - 576	87	319 / 365	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK252060.1	846	1e-113	126 - 454	89	294 / 329	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK251986.1	744	6e-111	76 - 428	87	308 / 353	CUST_39515_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK373742	770	6e-111	112 - 521	84	347 / 411	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK251852.1	741	6e-111	129 - 481	87	308 / 353	CUST_39512_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK374191	752	6e-111	111 - 463	87	308 / 353	CUST_39476_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK252601.1	938	2e-110	127 - 469	88	302 / 344	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
AK366376	1562	2e-110	106 - 460	87	310 / 356	CUST_35203_PI390587928 CUST_39473_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK251633.1	761	2e-110	109 - 463	87	310 / 356	CUST_39473_PI390587928 CUST_35203_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK374797	691	3e-109	105 - 507	84	348 / 412	CUST_39511_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK252540.1	738	1e-108	106 - 511	84	342 / 406	CUST_39525_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00239 ABC00286 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC34584
AK369442	685	1e-107	67 - 419	87	306 / 353	CUST_39489_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC34584 ABC44597
AK376310	633	1e-107	76 - 428	87	306 / 353	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK250752.1	723	2e-106	118 - 525	84	343 / 409	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK374121	736	6e-106	113 - 465	86	305 / 353	CUST_39472_PI390587928 CUST_33969_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC42929
MLOC_24886.1	550	2e-105	153 - 507	86	307 / 356	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK248534.1	712	1e-102	115 - 467	86	303 / 353	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK373523	676	2e-100	125 - 511	84	327 / 390	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_68568.2	976	2e-100	157 - 490	87	289 / 334	CUST_39524_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00494 ABC00648 ABC00709 ABC00869
MLOC_68568.1	689	2e-100	158 - 491	87	289 / 334	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00494 ABC00648 ABC00709 ABC00869
AK365600	715	2e-96	109 - 487	84	325 / 389	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_65183.1	1053	6e-96	401 - 794	83	329 / 397	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00443 ABC00494 ABC00571 ABC00656 ABC00709 ABC17259
MLOC_38467.1	1710	2e-95	1433 - 1710	90	249 / 278	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.3	1144	2e-95	867 - 1144	90	249 / 278	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.2	1688	2e-95	1411 - 1688	90	249 / 278	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_23198.1	524	2e-91	172 - 524	84	297 / 353	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584
MLOC_72638.2	773	3e-89	232 - 540	86	268 / 311	None	ABC00016 ABC00096 ABC00119 ABC00145 ABC00154 ABC00167 ABC00188 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00709 ABC44597
MLOC_65183.2	490	1e-87	102 - 456	83	298 / 358	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00443 ABC00494 ABC00571 ABC00656 ABC00709 ABC17259
AK371572	872	6e-81	332 - 663	83	276 / 332	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
MLOC_25652.1	512	3e-79	181 - 512	83	275 / 332	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259
AK364340	651	6e-76	78 - 456	81	307 / 381	None	ABC00145 ABC00154 ABC00167 ABC00188 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00709 ABC44597
MLOC_40625.1	370	6e-76	3 - 264	86	234 / 271	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_50368.1	374	3e-69	1 - 227	88	199 / 227	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_35155.1	682	1e-68	148 - 472	81	266 / 327	CUST_39469_PI390587928	ABC00016 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00154 ABC00167 ABC00188 ABC00321 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00671 ABC00709 ABC00869 ABC44597
MLOC_81367.2	510	2e-66	304 - 510	89	184 / 207	CUST_39452_PI390587928 CUST_21691_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
MLOC_42937.1	386	2e-66	131 - 384	85	218 / 257	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_68554.1	197	6e-66	1 - 197	90	177 / 197	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259
AK374620	653	2e-65	151 - 475	81	266 / 329	CUST_39519_PI390587928	ABC00016 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00321 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00671 ABC00709 ABC00869
MLOC_31809.1	177	8e-60	1 - 177	90	160 / 177	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259