barSeed - Barley Seed Development Database

Probe ABC31767

Source Contig ABC31767

barSeed

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Affymetrix Source Sequence (388 bp)

>ABC31767 388
GTCCCCAACATCAACACGGTGTTGCTCCCCAAGAGGACCCCGGAAAAGAAGGGCAAGGCG
CCAAAGTCCCCCAAGAAGGCGCCCAAGTCCCCCAAGAAGGCCGCCAAGTCGCCCAAAAAG
GCCCCCCCCCCAAAAAAGGCCTGATGGAAATGCGTTTTGTGTCGTTTAGGCTGTGTGCTG
CGAAGTGTTCTTCTTCTGAATCTGAATAGGGGTGTGAAGTCGTTCGTTAGTTGTTAATGT
CCCTTGTGTTGTGATGGAAGGAATTCAGAAATCTCGTTTGAGTTCCCAAATATGCCCTGG
AGATTTGCATTTGTGACGCGCGACATGTTGCCCGTGCCCCTGAAATTGGCAAATGAATTT
TGCCAGCTGCCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_15497.1	785	3e-165	365 - 733	95	351 / 369	CUST_39486_PI390587928	ABC00076 ABC00188 ABC00412 ABC31767 ABC39313
AK248367.1	737	5e-128	432 - 721	95	276 / 290	CUST_39486_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
AK249306.1	821	2e-57	615 - 806	88	171 / 195	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
AK371572	872	3e-55	684 - 872	88	168 / 192	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313