barSeed - Barley Seed Development Database

Probe ABC00412

Source Contig ABC00412

barSeed

Links

Affymetrix Source Sequence (730 bp)

>ABC00412 730
GGCTCAGTCTGGCTCTCTCCATCTCCATCCCAATCCCGACCTACCGCCCGCTCCCGCAGC
AAGGCATGGACGCCTCCGGCACCGTCGCGAAGGGCAAGAAGGGCGCCGCCGGGCGCAAGG
CCGGCGGCCCCAGGAAGAAGTCGGTGTCCCGCTCGGTCAAGGCCGGCCTCCAGTTCCCCG
TCGGCCGCATCGGGCGGTACCTCAAGAAGGGCCGCTACGCGCAGCGCGTCGGCACGGGCG
CCCCCGTCTACCTCGCGGCCGTCCTCGAGTACCTGGCCGCCGAGCTGCTTGAGCTCGCCG
GGAACGCCGCCAAGGACAACAAGAAGAGCCGCATCATCCCCCGCCACCTGTTGCTCGCCG
TCAGGAACGACGAGGAGCTCGGCAAGCTGCTGGCCGGCGTCACCATCGCGCACGGCGGCG
TGGTCCCCAACATCAACACGGTGCTGCTCCCCAAGAGGACCGCGGAGAAGGAGGGCAAGG
CGCCAAAGTCCCCCAAGAAGGCGCCCAAGTCCCCCAAGAAGGCCGCCAAGTCGCCCAAGA
AGGCCGCCACCCCGAAGAAGGCCTGATGGAGATGCGTTCTGTGTCGTTTAGGCTGTGTGC
TGCGTAGTGTTCTTCTTCTGAATCTGAATAGGGGTGTGAAGTCGTTCGTTAGTTGTTGAT
GTACCTTGTGTTGTGATGGAAGGAATTCAGAAATCTCGTTTGAGTTCCCAAAAAAAAAAA
AAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248367.1	737	0.0	11 - 734	99	723 / 724	CUST_39486_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
AK374797	691	0.0	85 - 549	93	431 / 465	CUST_39511_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK373523	676	0.0	110 - 553	93	414 / 444	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
AK371572	872	1e-71	684 - 872	93	178 / 192	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
MLOC_15497.1	785	1e-176	444 - 785	99	340 / 342	CUST_39486_PI390587928	ABC00076 ABC00188 ABC00412 ABC31767 ABC39313
MLOC_68568.2	976	2e-168	121 - 558	91	399 / 438	CUST_39524_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00494 ABC00648 ABC00709 ABC00869
MLOC_68568.1	689	2e-168	122 - 559	91	399 / 438	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00494 ABC00648 ABC00709 ABC00869
AK369538	691	1e-166	77 - 541	90	417 / 465	CUST_35181_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00443 ABC00571 ABC00648 ABC00656 ABC00709 ABC00869 ABC17259
AK365600	715	5e-165	118 - 561	90	401 / 444	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_25652.1	512	9e-158	116 - 512	92	368 / 400	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259
MLOC_65183.1	1053	7e-134	399 - 840	86	389 / 451	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00443 ABC00494 ABC00571 ABC00656 ABC00709 ABC17259
MLOC_33635.1	424	7e-134	103 - 424	93	301 / 322	None	ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00412 ABC00414 ABC00709 ABC00869 ABC17259
AK251852.1	741	3e-127	127 - 451	92	299 / 325	CUST_39512_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK252060.1	846	2e-125	124 - 463	91	309 / 341	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK374121	736	2e-125	102 - 509	87	356 / 409	CUST_33969_PI390587928 CUST_39472_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC42929
AK250581.1	781	7e-124	124 - 540	86	360 / 417	CUST_39507_PI390587928 CUST_39452_PI390587928 CUST_21691_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
AK248534.1	712	3e-122	104 - 511	87	353 / 408	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK369442	685	4e-121	64 - 490	86	367 / 428	CUST_39489_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC34584 ABC44597
MLOC_65183.2	490	2e-120	100 - 456	89	324 / 366	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00443 ABC00494 ABC00571 ABC00656 ABC00709 ABC17259
AK252601.1	938	6e-120	127 - 545	85	361 / 423	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
AK374191	752	6e-120	109 - 512	86	349 / 404	CUST_39476_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK249306.1	821	2e-80	615 - 818	93	194 / 208	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
AK366376	1562	7e-119	103 - 499	86	344 / 398	CUST_39473_PI390587928 CUST_35203_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK251633.1	761	7e-119	106 - 502	86	344 / 398	CUST_35203_PI390587928 CUST_39473_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK376310	633	7e-119	74 - 398	90	294 / 325	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
MLOC_25856.1	978	7e-119	687 - 978	93	272 / 292	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00167 ABC00188 ABC00412 ABC00414 ABC00709 ABC00869
MLOC_25856.2	861	9e-118	572 - 861	93	270 / 290	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00167 ABC00188 ABC00412 ABC00414 ABC00709 ABC00869
AK251986.1	744	3e-117	74 - 398	90	293 / 325	CUST_39515_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK373742	770	1e-116	103 - 507	86	348 / 406	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
MLOC_43244.1	861	4e-116	291 - 688	86	342 / 398	CUST_7984_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
AK252540.1	738	2e-115	103 - 499	86	342 / 398	CUST_39525_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00239 ABC00286 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC34584
AK250752.1	723	6e-115	107 - 511	85	347 / 406	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_24886.1	550	6e-115	142 - 546	85	347 / 406	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_32058.1	266	2e-114	1 - 266	95	252 / 266	None	ABC00028 ABC00076 ABC00118 ABC00145 ABC00167 ABC00188 ABC00412 ABC00414 ABC00571 ABC00709 ABC00869
MLOC_40625.1	370	9e-113	1 - 284	93	263 / 284	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_18705.1	455	2e-109	1 - 254	95	241 / 254	CUST_39511_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00167 ABC00188 ABC00412 ABC00414 ABC00656 ABC00709 ABC00869 ABC17259
MLOC_48186.1	317	3e-107	65 - 317	94	239 / 253	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_42937.1	386	2e-104	116 - 384	92	248 / 269	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_38467.1	1710	1e-102	1424 - 1710	90	260 / 288	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.3	1144	1e-102	858 - 1144	90	260 / 288	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.2	1688	1e-102	1402 - 1688	90	260 / 288	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_28533.1	520	2e-55	1 - 153	92	144 / 156	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00188 ABC00412 ABC00414 ABC00709 ABC17259
MLOC_50368.1	374	1e-87	1 - 257	89	230 / 257	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_28615.1	503	5e-86	1 - 213	94	200 / 213	None	ABC00054 ABC00076 ABC00412
MLOC_42906.1	312	2e-85	110 - 312	95	193 / 203	None	ABC00028 ABC00076 ABC00118 ABC00188 ABC00412 ABC00414
MLOC_68554.1	197	5e-76	1 - 197	93	183 / 197	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_24650.1	168	6e-75	16 - 168	100	153 / 153	None	ABC00412
MLOC_72638.2	773	4e-72	220 - 556	81	277 / 340	None	ABC00016 ABC00096 ABC00119 ABC00145 ABC00154 ABC00167 ABC00188 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00709 ABC44597
MLOC_41065.1	252	6e-65	84 - 252	93	158 / 169	None	ABC00412 ABC00414
MLOC_28615.2	152	5e-61	1 - 152	95	144 / 152	None	ABC00054 ABC00412
MLOC_57143.1	818	2e-59	337 - 635	81	244 / 302	None	ABC00016 ABC00096 ABC00119 ABC00286 ABC00321 ABC00350 ABC00412 ABC00550 ABC00709 ABC44597